Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00471 ATGATCGGTGTCAACTACAAGGGTGAGGAAAAGCAGTTTGCTGCTGAGGAAATCTCATCTATGGTTTTGATTAAGATGAGGGAGATCGCAGAGGCTTATCTTGGTTCTACTGTGAAGAATGCTGTTGTTACAGTTCCTGCTTACTTTAATGACTCTCAGCGTCAAGCTACCAAAGATGCTGGTGTTATTGCAGGTCTCAATGTTTTGAGAATTATCAATGAGCCAACTGCTGCAGCTATTGCATACGGGCTTGACAAGAAAGCTACAAGTGTTGGTGAGAAGAATGTGTTGATTTTTGATTTGGGTGGTGGTACTTTTGATGTCTCTCTTCTCACTATTGAAGAGGGTATCTTTGAAGTTAAAGCCACTGCTGGTGATACCCATCTTGGTGGTGAAGATTTTGATAATAGAATGGTTAACCATTTTGTTCAAGAGTTTAAGAGAAAGAACAAGAAAGATATTAGTGGTAACCCTAGGGCACTTAGGAGGTTGAGAACAGCTTGTGAGAGGGCGAAGAGGACTCTCTCATCAACTGCTCAGACCACTATTGAGATTGATTCTCTTTATGAGGGTGTTGATTTTTACACTACAATCACCCGTGCTAGGTTTGAGGAGCTTAACATGGATCTCTTCAGGAAGTGTATGGAGCCTGTAGAGAAGTGTTTGAGAGATGCAAAGATGGACAAGAGCACAGTTCATGATGTTGTTCTTGTTGGTGGTTCTACTAGGATTCCCAAAGTTCAGCAATTGTTGCAGGACTTCTTCAATGGGAAGGAGCTTTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTACGGAGCTGCTGTCCAAGCAGCTATTTTGAGCGGTGAGGGTAATGAGAAAGTTCAAGATTTGTTGCTTTTGGATGTCACTCCATTGTCTCTTGGTTTGGAGACTGCCGGAGGTGTCATGACTGTATTGATTCCAAGGAACACTACCATTCCCACCAAGAAGGAACAAGTTTTCTCTACTTACTCAGATAACCAACCTGGTGTCTTGATTCAAGTTTATGAGGGTGAGAGAACAAGAACAAAGGATAACAACTTGTTGGGAAAATTCGAGCTTTCCGGCATTCCACCTGCTCCCCGTGGTGTTCCTCAGATCACTGTTTGCTTTGATATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAGGACAAAACAACTGGGCAGAAGAACAAGATCACCATTACCAACGACAAAGGAAGGTTGTCTAAGGAAGAAATCGAGAAGATGGTTCAAGAGGCAGAGAAATACAAGAGCGAAGATGAGGATCACAAGAAGAAGGTTGAGGCCAAAAACTCCTTGGAGAACTATGCTTACAACATGAGGAACACTATCAAAGATGACAAGATCAGTTCAAAGCTTTCTCCAAGTGACAAGAAACTGATTGAGGATGCAATTGAGCAGGCCATTCAATGGCTCGATGCCAATCAGCTTGCTGAAGCTGATGAATTTGAAGACAAGATGAAGGAGCTTGAGACCATCTGCAATCCTATTATTGCAAAGATGTATCAAGGTGGAGCTGGCGAAGGTCCAGAGGTTGATGATGATGCTCCACCTCCAAGTGGCGGCGGTGCTGGTCCCAAGATTGAGGAGGTCGACTAA 1629 0.4352 MIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEDHKKKVEAKNSLENYAYNMRNTIKDDKISSKLSPSDKKLIEDAIEQAIQWLDANQLAEADEFEDKMKELETICNPIIAKMYQGGAGEGPEVDDDAPPPSGGGAGPKIEEVD 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00471 542 ProSitePatterns Heat shock hsp70 proteins family signature 3. 235 249 IPR018181 -
Car03g00471 542 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 523 - -
Car03g00471 542 PRINTS 70kDa heat shock protein signature 41 61 - -
Car03g00471 542 PRINTS 70kDa heat shock protein signature 104 114 - -
Car03g00471 542 PRINTS 70kDa heat shock protein signature 232 248 - -
Car03g00471 542 PRINTS 70kDa heat shock protein signature 264 284 - -
Car03g00471 542 PRINTS 70kDa heat shock protein signature 291 310 - -
Car03g00471 542 PRINTS 70kDa heat shock protein signature 372 388 - -
Car03g00471 542 Gene3D - 95 261 - -
Car03g00471 542 Gene3D Actin; Chain A, domain 4 133 213 - -
Car03g00471 542 Gene3D - 1 94 - -
Car03g00471 542 MobiDBLite consensus disorder prediction 513 542 - -
Car03g00471 542 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 286 440 IPR029047 -
Car03g00471 542 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 287 444 IPR029047 -
Car03g00471 542 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 438 518 IPR029048 -
Car03g00471 542 SUPERFAMILY Actin-like ATPase domain 2 86 IPR043129 -
Car03g00471 542 Gene3D - 441 514 IPR029048 -
Car03g00471 542 Coils Coil 416 436 - -
Car03g00471 542 PANTHER HEAT SHOCK PROTEIN 70KDA 1 523 IPR013126 GO:0005524|GO:0140662
Car03g00471 542 SUPERFAMILY Actin-like ATPase domain 93 283 IPR043129 -
Car03g00471 542 ProSitePatterns Heat shock hsp70 proteins family signature 2. 98 111 IPR018181 -
Car03g00471 542 Pfam Hsp70 protein 2 513 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00471 Car-Chr3 20047854 20049482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00471 1 542 Calmodulin-binding Proteins AT3G12580 91.743 0.0 1010
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00471 K03283 - cit:102617514 993.416