Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00452 ATGATTCTGAACTCTCACCAGATGTCACCAAATTTTCTGCTCTGGCTTGTGCTTGGTGTTTTCTTTATGGCTACAATGCTAAGGATGTATGCAACATGTCAACAGCTTCAAGCACAGGCCCAAGCTCATGCAGCAGCAGCCAGTGGCCTTCTTGGCCACATAGAACTACGGTTGCATATGCCGCCATCAATAGCACTTGCAAGCCGAGGGCGTTTGCAGGGTCCTAGACTTCAACTGGCACTTCTTGTGAGAGTTTGA 258 0.4845 MILNSHQMSPNFLLWLVLGVFFMATMLRMYATCQQLQAQAQAHAAAASGLLGHIELRLHMPPSIALASRGRLQGPRLQLALLVRV 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00452 85 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 84 - -
Car03g00452 85 PANTHER TARGET OF ERK KINASE MPK-1 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00452 Car-Chr3 19483410 19483778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00452 1 84 C3H Transcription Factor Family AT3G55530 85.714 9.30e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00452 K16283 - cam:101493486 150.599