Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00445 ATGAGGAGGAGGACTTCTCTTACACATTCTCACAAATACTTGTTGCTGCTGCCCACTGCAAACACACGCACTGACACCAACCGTTTCTACTCTCATAGAGTGAAAGTGATGGTGAACTTGATGGAGTGGCAGAAACAGCGATGGAATCATCAGAACGCAGCGAATGTTGAAATGATGTACGTGAAGGTCATGACTGATGAACAACTTGAAACGCTTCGGAAACAAATTGCTGTTTACGCAACTATTTGTGAACAGCTTATTGAAATGCATAAAACCCTCTCTACTCACCAAGATCTCACTGGGGCTAGGCTGGGAGGTATGTATTGTGACCAATTGATGGGTTCTGGTGGACACAAAATAAGTTCAAGGCAGCGTTGGACACCGACACCTTTGCAACTTCAAATTCTAGAGCGAATATTTGAAGCTGGAACAGGAACTCCAAGCAAGGAAAAGATAAAGGAGATAACTGCGGATTTAAGCAAGCACGGGCAGATTTCTGAGACCAATGTATATAATTGGTTTCAGAATAGGCGCGCTAGGTCAAAGAGAAAGCAGCAGAGTGCAGTGCCTAGTAGCGTTAATGCTGAATCAGAAGTGGAGAATGAGGTTGATTCCAAAGATAAGAAGACTATACTGGATGAGTTTTTTGCGCCTCAGCCTACTGAAAATTTGAGCTTCCAAGACCCTCAAGTGTGCTCTGATTTGCAGTACTTCAATCCTGAATCGGATGACAGTTTGCGACCTGCTAGAAACTTTGATCATGAGCCTGTTTTTGATGGGATGCTATCAAACTCAAGGAGCAGCGACTATCTTACTGGAAAAATAGAAGCATCTGAGAGCTTCAACTTATACCAGTCTGCAGGCGACTACGGCATGGAAGGTTGA 885 0.4384 MRRRTSLTHSHKYLLLLPTANTRTDTNRFYSHRVKVMVNLMEWQKQRWNHQNAANVEMMYVKVMTDEQLETLRKQIAVYATICEQLIEMHKTLSTHQDLTGARLGGMYCDQLMGSGGHKISSRQRWTPTPLQLQILERIFEAGTGTPSKEKIKEITADLSKHGQISETNVYNWFQNRRARSKRKQQSAVPSSVNAESEVENEVDSKDKKTILDEFFAPQPTENLSFQDPQVCSDLQYFNPESDDSLRPARNFDHEPVFDGMLSNSRSSDYLTGKIEASESFNLYQSAGDYGMEG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00445 294 SMART HOX_1 121 188 IPR001356 GO:0003677
Car03g00445 294 PANTHER - 39 292 - -
Car03g00445 294 SUPERFAMILY Homeodomain-like 121 187 IPR009057 -
Car03g00445 294 Pfam Homeodomain 123 183 IPR001356 GO:0003677
Car03g00445 294 ProSiteProfiles 'Homeobox' domain profile. 119 184 IPR001356 GO:0003677
Car03g00445 294 Gene3D - 125 189 - -
Car03g00445 294 PANTHER WUSCHEL-RELATED HOMEOBOX 13 39 292 IPR044559 GO:0003700
Car03g00445 294 CDD homeodomain 123 185 IPR001356 GO:0003677
Car03g00445 294 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00445 Car-Chr3 19271878 19277476 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00445 40 294 Wox Gene Family AT4G35550 48.110 4.66e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car03g00445 Homeodomain 5.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00445 - - cam:101512693 361.303