Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00443 ATGTATTGTGACCAATTGATGGGTTCTGGTGGACACAAAATAAGTTCAAGGCAGCGTTGGACACCGACACCTTTGCAACTTCAAATTCTAGAGCGAATATTTGAAGCTGGAACAGGAACTCCAAGCAAGGAAAAGATAAAGGAGATAACTGCGGATTTAAGCAAGCACGGGCAGATTTCAGAGACCAATGTATATAATTGGTTTCAGAATAGGCGTGCTAGGTCAAAGAGAAAGCAGCAGAATGCAGCGCCTAGTAGCGTTAATGCTGAATCAGAAGTGGAGAATGAGGTTGATTCTAATAATAACAAGATTATACTGGATGAGTTTGTTGTGCCTCAGCCTGCTGAAAATTTAAGCTTCCAAAACCCTCAAGTGTGCTCTGATTTGCAGTACTTCAATCCTGAATCGGATGACAGTTTGCGACTGGCTAGAAACTTTGATCATGAGCCTGTTTTTGATGGGATGCTATCAAACTCAAGGAGCAGCGACTATCTTACTGGAAAAATAGAAACATCTGAGAGCTTCAACTTATACCAGTCTGCAGGCGACTACGGCATGGAAGGTTGA 567 0.4233 MYCDQLMGSGGHKISSRQRWTPTPLQLQILERIFEAGTGTPSKEKIKEITADLSKHGQISETNVYNWFQNRRARSKRKQQNAAPSSVNAESEVENEVDSNNNKIILDEFVVPQPAENLSFQNPQVCSDLQYFNPESDDSLRLARNFDHEPVFDGMLSNSRSSDYLTGKIETSESFNLYQSAGDYGMEG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00443 188 CDD homeodomain 17 79 IPR001356 GO:0003677
Car03g00443 188 MobiDBLite consensus disorder prediction 1 20 - -
Car03g00443 188 MobiDBLite consensus disorder prediction 75 95 - -
Car03g00443 188 SMART HOX_1 15 82 IPR001356 GO:0003677
Car03g00443 188 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 186 IPR044559 GO:0003700
Car03g00443 188 MobiDBLite consensus disorder prediction 79 95 - -
Car03g00443 188 Gene3D - 18 84 - -
Car03g00443 188 SUPERFAMILY Homeodomain-like 14 81 IPR009057 -
Car03g00443 188 PANTHER - 1 186 - -
Car03g00443 188 Pfam Homeodomain 17 77 IPR001356 GO:0003677
Car03g00443 188 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00443 Car-Chr3 19255167 19257064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00443 1 188 Wox Gene Family AT4G35550 45.972 7.57e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car03g00443 Homeodomain 2.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00443 - - cam:101512693 358.607