Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00438 ATGGCAATCTATAGAATTGCAATTGGGTCTCCTGGAGAGGCTGGTCAACCTGATGCAATTAGAGCTGCATTTGCTGAATTTTTTTCTATGCTCATTTTTGTTTTTGCAGGGGAAGGCTCTGGCATGGCTTACAACAAACTTACCAATAATGGACCTGCAACACCTGCTGGTCTCATAGCTGCATCACTGTCACATGCATTTGGACTTTTTGTTGCTGTTTCTGTTGGAGCAAATGCCTCTGGTGGTCATGTCAACCCAGCAGTTACATTTGGTGCTTTCATGGGAGGAAACATTACCCTTTTGAGAAGTATTTTATATTGGATTGCACAATTACTTGGTTCAGTTGTTGCTTGCATTCTTCTCAAGTCTGCTACTGGTGGAATGGAGACATCAGCTTTTGCTATATCTTCAGATATATCAGTTTGGAATGCACTAGTTTTTGAAATTGTGATGACATTTGGATTGGTATATACAGTTTATGCAACAGCAGTAGATCCAAAAAAAGGAAATGTAGGAGTTGTTGCTCCAATTGCAATTGGTTTTATTGTTGGTGCAAATATCTTAGCTGGTGGAGCATTTGATGGTGCATCAATGAATCCAGCTGTCTCATTTGGGCCTGCAGTTGTTAGTTGGACATGGACTCATCATTGGGTCTATTGGGTTGGCCCATTTACTGGTGCAGCAATTGCTGCAATCATTTATGATAATATCTTTATTGGTGACGATGGTCATGAACCCCTCAGTGATTTTTAG 753 0.4064 MAIYRIAIGSPGEAGQPDAIRAAFAEFFSMLIFVFAGEGSGMAYNKLTNNGPATPAGLIAASLSHAFGLFVAVSVGANASGGHVNPAVTFGAFMGGNITLLRSILYWIAQLLGSVVACILLKSATGGMETSAFAISSDISVWNALVFEIVMTFGLVYTVYATAVDPKKGNVGVVAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTHHWVYWVGPFTGAAIAAIIYDNIFIGDDGHEPLSDF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00438 250 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g00438 250 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g00438 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g00438 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g00438 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g00438 250 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g00438 250 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g00438 250 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g00438 250 Gene3D Glycerol uptake facilitator protein. 4 249 IPR023271 -
Car03g00438 250 PANTHER AQUAPORIN-8 1 247 IPR034294 -
Car03g00438 250 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 247 - -
Car03g00438 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Car03g00438 250 SUPERFAMILY Aquaporin-like 17 240 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00438 Car-Chr3 18971266 18972553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00438 1 250 Major Intrinsic Protein MIP AT4G01470 82.143 7.72e-150 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00438 K09873 - gmx:100788583 473.396