Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00437 ATGATGATATCGAGGGGATTGTTCGGGTGGTCCCCGCCGCATGTACAACCGCTAACGCCGGTTTCGGAGGTATCGGAGCCACCGGAATCTCCATCGCCGTACTTAGACCTCGGCGCTGAGACCTCCGCGTCGCAACAGATggaggtggaagaggaaatggaggagcaggaggaaatggaGCCGCCGCCTGCCGCGGTTCCTTTCTCGAAGCTATTCGCGTGTGCCGACCGGTTCGATTGGTTTCTTATGGCGGTTGGTTCCGTCGCTGCCGCGGCTCATGGAACTGCGCTTGTTGTTTACTTGCATTACTTCGCGAAGATTATTCATGTGTTGCGGATGGATACTCAACCAGCTTCTTCGCAGGAGAGGTTTGACAAGTTCACTGAGCTTGCTTTAACCATTGTTTACATTGCAGCAGGAGTTTTTGTAGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACTGGAGAGCGACAAACTGCTGTCATCAGGTCCAAATATGTTCAAGTCTTACTAAATCAGGATATGAGTTTTTTCGATACTTACGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTTCTTATCCAGTCTGCTCTTAGCGAAAAAGTTGGAAATTATATTCATAATATGGCTACTTTCTTCAGTGGTCTTGTCATTGGCCTTATCAATTGCTGGCAGATTGCTTTGATAACATTAGCAACAGGCCCTTTTATTGTTGCTGCAGGGGGAATATCGAATATATTCCTCCATAGACTTGCAGAGAACATCCAAGATGCATATGCTGAAGCAGCTAGCATTGCTGAACAGGCAGTTTCCTATGTAAGGACATTGTATGCATTTACAAATGAAACGTTGGCCAAGTACTCATATGCAACATCACTGCAAGCTACTCTTAGATATGGCATATTAATAAGTCTTGTTCAAGGGCTAGGTCTTGGATTCACGTATGGACTTGCAATATGTTCTTGTGCATTGCAACTCTGGGTTGGAAGATTCTTGGTTATTCACGGAAAAGCACATGGTGGTGAAATTATAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGTTTGAATCAAGCAGCTACAAATTTCTACTCCTTTGAACAAGGGAGGATAGCTGCTTATAGATTATATGAGATGATAACCCGATCATCCTCTTCTGTTAATCATGATGGCACTGCCCATGACTCTGTGCAAGGAAATATAGTGTTTCGGAATGTTTATTTCAGCTATCTGTCTCGTCCCGAGATCCCTATCTTGAGTGGATTTTATCTCACTGTACCTTCTAAGAAAGCTGTAGCACTTGTTGGAAGAAATGGCTCTGGAAAAAGTAGTATCATTCCACTCATGGAGCGCTTCTATGATCCTACATTAGGAGAAGTTCTTTTAGATGGCGAAAACATTAAGAATTTGAATTTGGAATGGCTGAGGGGCCAAATAGGACTAGTTACCCAGGAGCCTGCTTTACTCAGTTTGAGCATAAGAGATAACATTGCTTATGGGAGGGATGTCACACTGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATTAGCTCATTGGAGAAAGGTTATGACACACAGGTTGGTAGGGCAGGTCTAGCTTTGACTGAAGAGCAGAAAATTAAACTTTCAATTGCAAGAGCCGTGCTTCTAAATCCATCAATTCTTCTGCTTGATGAAGTCACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAGGAGGCTTTGGATCTGCTTATGTTGGGACGCTCAACGATAATAATTGCTCGAAGGCTTAGTCTCATTAGGAATGCTGATTATATAGCCGTTATGGAAGAGGGTCAACTCGTTGAAATGGGTACTCATGATGAATTATTGAACCTCGATGGCTTATATGCAGAGCTTCTACGATGCGAAGAGGCAGCAAAACTTCCCAAGCGGATGCCTGCTCGAAACTACAAGGAGACTGCAGTATTTCAAATTGAGAAGGATTCTTCAGCAAGCCATAGCTTCAATGAACCATCATCCCCCAAAATGATGAAGTCACCTTCTCTTCAAAGAATATCTAATGTATCACATTCGCGACCTTCAGATGCCATCTTTAACTTTCAAGAATCACCTAAAGTCCTGAGCCCACCACCTGAGAAGATGCTGGAAAATGGTCAAGCTTTGGATGCAGCTGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAAATGAGACTGCCGGAGTTACCCAAGATTGATATACAATCTGTACATCGGCAAAAATCAAATGGTTCTGACCCAGAATCCCCCATTTCACCACTTTTAATATCTGATCCTAAAAATGAACGCTCTCATTCACAGACTTTTAGTAGACCACATAGTCATTCTGATGATTCTTCAGTTACAATGAGAGGGGAAAAGGAAGCACGGCAGCGGAAACCACCATCACTTCGGAAGTTGGCGGAGCTTAGTTTTGCTGAGTGGCTTTATGCTGTCTTAGGAAGCATTGGTGCTGCTACCTTTGGTTCATTCAATCCTCTTCTTGCTTATGTTATTGGCCTTGTGGTGACAGCTTACTATAGAATTAATGACCAACATCACTTAGAAAAGGAGGTAAACAAGTGGTGCTTGGTCATTGGTTGCATGGGTATTATAACAGTTATTGCCAACTTTTTGCAGCACTTCTACTTTGGTATTATGGGAGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGGAATGAAGTAGGGTGGTTTGACGATGAGGAAAACAGTGCTGACAATTTATCCATGAGATTGGCCAATGATGCTACTTTTGTACGGGCTGCTTTTAGCAATCGACTTTCCATATTTATACAGGACATTGCTGCAATTATTGTCGGTCTTCTCATTGGCGCTTTGCTGCACTGGCGGTTAGCACTGGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTTCTGCAGTTGCCCAGAAATTGTGGCTAGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAAGCATCATTAGTTCTCGAAGATGCTGTTAGAAATATATACACTGTTGTTGCATTTTGTGCTGGCAACAAGGTAATGGAGCTCTACAGGCTGCAATTATTGAAAATATTTAAGAAAAGCTTTCTTCATGGGATGGCGATTGGTTTTGCTTTCGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCAATATGTATTAAAAATGGTTACGTAGAACCATCCACTGCACTGAAGGAGTACATGGTTTTCTCATTTGCCACATTTGCCCTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTTAAACGACGAAAATCTCTCATATCAGTGTTTGACATTATAAACCGTGTGCCTAAAATTGATCCTGATGACAACGCAGCGTTGAAGCCGCCCAATGTATACGGAAGCATCGAGTTAAAAAACGTTGATTTTTGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTAGTCTCAAAGTTACTGGGGGCCAAACAGTTGCTATTGTTGGAGTTTCAGGGTCAGGAAAAAGCACTATAATATCTTTGATTGAGAGATTTTACGATCCAGTTGCGGGGCAAGTTTTACTGGATGGGAGGGATTTAAAGCTATATAACTTGAGATGGTTGAGGAGCCACCTTGGTTTTATTCAACAAGAACCAATTATCTTCTCAACAACCATAAGGGAAAACATTATATATGCAAGACATAATGCCAGTGAAGCTGAGATGAAAGAGGCGGCAAGAATAGCAAATGCTCATCATTTTATTAGCAGCTTGCCTCACGGGTATGACACTCATGTTGGGATGAGAGGCGTTGATTTAACCCCAGGACAGAAACAGAGAATTGCAATCGCAAGGGTAGTGCTGAAAAATGCACCTATCTTATTGTTGGATGAAGCAAGTTCGTCGATTGAATCCGAGTCAAGCCGAGTTATACAAGAAGCTCTAGACACGCTAATAATGGGAAACAAGACCACTATTTTAATAGCGCATAGAGCTGCAATGATGAGGCATGTGGACAATATTGTAGTGCTTAATGGAGGACGGATAGTGGAGGAAGGTAGTCATGATTCGTTGGTTGCAAAGAATGGTCTGTATGTCCGGTTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTGGTTAA 4218 0.4215 MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDLGAETSASQQMEVEEEMEEQEEMEPPPAAVPFSKLFACADRFDWFLMAVGSVAAAAHGTALVVYLHYFAKIIHVLRMDTQPASSQERFDKFTELALTIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFEQGRIAAYRLYEMITRSSSSVNHDGTAHDSVQGNIVFRNVYFSYLSRPEIPILSGFYLTVPSKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLNLEWLRGQIGLVTQEPALLSLSIRDNIAYGRDVTLDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLNLDGLYAELLRCEEAAKLPKRMPARNYKETAVFQIEKDSSASHSFNEPSSPKMMKSPSLQRISNVSHSRPSDAIFNFQESPKVLSPPPEKMLENGQALDAADKEPSIRRQDSFEMRLPELPKIDIQSVHRQKSNGSDPESPISPLLISDPKNERSHSQTFSRPHSHSDDSSVTMRGEKEARQRKPPSLRKLAELSFAEWLYAVLGSIGAATFGSFNPLLAYVIGLVVTAYYRINDQHHLEKEVNKWCLVIGCMGIITVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDIAAIIVGLLIGALLHWRLALVAFATLPILCVSAVAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLLKIFKKSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKNGYVEPSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIINRVPKIDPDDNAALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVTGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRSHLGFIQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVIQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKALRQHRLG 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00437 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 641 IPR027417 -
Car03g00437 1405 Pfam ABC transporter transmembrane region 86 357 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g00437 1405 Pfam ABC transporter transmembrane region 843 1102 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g00437 1405 MobiDBLite consensus disorder prediction 748 816 - -
Car03g00437 1405 Gene3D ABC transporter type 1, transmembrane domain 70 658 IPR036640 GO:0005524|GO:0016021
Car03g00437 1405 Gene3D - 397 644 IPR027417 -
Car03g00437 1405 MobiDBLite consensus disorder prediction 709 735 - -
Car03g00437 1405 SMART AAA_5 1183 1370 IPR003593 -
Car03g00437 1405 SMART AAA_5 434 613 IPR003593 -
Car03g00437 1405 MobiDBLite consensus disorder prediction 668 695 - -
Car03g00437 1405 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g00437 1405 CDD ABC_6TM_Pgp_ABCB1_D2_like 828 1139 - -
Car03g00437 1405 Gene3D - 1154 1393 IPR027417 -
Car03g00437 1405 SUPERFAMILY ABC transporter transmembrane region 71 382 IPR036640 GO:0005524|GO:0016021
Car03g00437 1405 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 833 1125 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car03g00437 1405 MobiDBLite consensus disorder prediction 757 771 - -
Car03g00437 1405 Gene3D ABC transporter type 1, transmembrane domain 1003 1153 IPR036640 GO:0005524|GO:0016021
Car03g00437 1405 Gene3D ABC transporter type 1, transmembrane domain 776 997 IPR036640 GO:0005524|GO:0016021
Car03g00437 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1146 1392 IPR027417 -
Car03g00437 1405 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 382 - -
Car03g00437 1405 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1156 1393 IPR003439 GO:0005524
Car03g00437 1405 PANTHER ABC TRANSPORTER B FAMILY 19 1401 - -
Car03g00437 1405 Coils Coil 39 59 - -
Car03g00437 1405 Pfam ABC transporter 1174 1322 IPR003439 GO:0005524
Car03g00437 1405 Pfam ABC transporter 428 572 IPR003439 GO:0005524
Car03g00437 1405 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 407 642 IPR003439 GO:0005524
Car03g00437 1405 Coils Coil 253 273 - -
Car03g00437 1405 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1401 - -
Car03g00437 1405 MobiDBLite consensus disorder prediction 785 816 - -
Car03g00437 1405 SUPERFAMILY ABC transporter transmembrane region 815 1141 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00437 Car-Chr3 18949583 18959964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00437 60 698 Calmodulin-binding Proteins AT2G36910 43.272 3.19e-164 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00437 K05658 - gmx:100789116 2498.39