Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00431 atgaAGCGGATATTTGAAGCTGGAACAGGAACTCCAAGCAAGGAAAAGATAAAGGAGATAACTGCGGATTTAAGCAAGCACGGGCAGATTTCTGAGACCAATGTATATAATTGGTTTCAGAATAGGCGCTCTAGGTCAAAGAGAAAGCAGCAGAGTGCAGCGCCTAGTAGTGTTAATGCTGAATCAGAAGTGGAGAATGAGGTTGATTCCAATGATAAGAAAATTATACTGGATGAGTTTGTTGCGCCTCAGCCTGCTGAAAAATTGAGCTTCCAAAACCTTCAAGTGTGCTCGGATTTGCAGTACTTCAATCCTGAATCGGATGACAGTTTGCGACCGGCTAGACACTTTGATCATGGGCCTGTTTTTGATGGGATGCTATCAAACTCAAGTATGTTGCTTACTTATATTGTGCCTTCTTTTTTTCCATGTTTTGATGTTTGTATGTATGATTAG 456 0.4079 MKRIFEAGTGTPSKEKIKEITADLSKHGQISETNVYNWFQNRRSRSKRKQQSAAPSSVNAESEVENEVDSNDKKIILDEFVAPQPAEKLSFQNLQVCSDLQYFNPESDDSLRPARHFDHGPVFDGMLSNSSMLLTYIVPSFFPCFDVCMYD 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00431 151 MobiDBLite consensus disorder prediction 42 68 - -
Car03g00431 151 Pfam Homeodomain 1 48 IPR001356 GO:0003677
Car03g00431 151 CDD homeodomain 1 50 IPR001356 GO:0003677
Car03g00431 151 Gene3D - 1 54 - -
Car03g00431 151 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 131 IPR044559 GO:0003700
Car03g00431 151 SUPERFAMILY Homeodomain-like 3 52 IPR009057 -
Car03g00431 151 ProSiteProfiles 'Homeobox' domain profile. 1 49 IPR001356 GO:0003677
Car03g00431 151 PANTHER - 2 131 - -
Car03g00431 151 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00431 Car-Chr3 18774846 18775572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00431 1 104 Wox Gene Family AT4G35550 46.457 8.70e-25 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car03g00431 Homeodomain 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00431 - - cam:105851745 273.092