Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00423 ATGGTAGGTAACGACGATGCTCGAGCTCCGTGCCACCTTTCATCTTCCCGGAAAATGTTTTGGCGTTCGGCGTCGTGGTCTTCTGCTCGCTCCTCCGCCGCAAACCCTTCCGGCGAACCGGAATCGAATTTCGCCGATCCAAATTCTGGTCCGGAGAATTCCAACCGGAGATTTCCTCCGCCGCCGTTGACGCCTCGGTCGCAGCAGAATTGTAAGGCGAGGTCATCATGTCTTCCGCCGCTTCAGCCACTTTCGATTGCTCGCCGGAGTTTGGACGAGTGGCCGAAGGCGAGTTCCGACGATATTGGGGAGTGGCCACAACCACCTACTACTCCTAGTGGAAGAGGTAATAACAGTAATTGCAATAGCAATGGTGAAAGATTGAAACTTGATTTGTCTCAAATTCAGCAGaataatattaataataatcatgatagtagaaataatGGTGGACTTGTCAAGAGAGATAAAATTGCTTTTTTTGATAAGGAATGTTCAAAAGTTGCTGAACATGTTTATCTTGGTGGTGATGCTGTTGCTAAAGATAGAGAAATTTTGAAAAGGAATGGGATAACTCATGTTTTGAATTGTGTTGGTTTTGTTTGTCCTGAATATTTCAAAGCTGATTTTGTGTATAGGACTTTGTGGTTGCAAGATAGTCCTAGTGAAGATATAACTAGTATTTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAAAAGAATGGGAGAGTTTTCGTGCATTGTTGTCAAGGTGTGTCTAGGTCAACTTCTCTGGTTATTGCTTACCTTATGTGGAGGGAAGGACAGAGTTTTGATGACGCATTTCAGTTTGTAAAGGCGGCAAGGGGTATTGCCGATCCGAACATGGGTTTCGCATGTCAGTTGTTGCAATGTCAGAAAAGGGTTCATGCATTTCCTCTTAGTCCTAGCTCTTTGTTGAGAATGTATAGGATTGCTCCGCATTCGCCGTATGATCCTTTGCATCTTGTTCCGAAAATGTTGACGGATCCGTCTTCAAATGCTTTGGATTCGAGGGGTGCGTTTATAGTGCACATACCTTCTGCAATATATGTTTGGATTGGTAAAAATTGTGAGGCTATCATGGAAAGGGATGCTAGAGGGGCTGCGGGTCAGATTGTTCGGTATGAGAGAGTGCAAGGATCTATTATCATGATTAAGGAAGGTGAGGAACCTCTTTCCTTTTGGGATGCTTTTTCGAAGTTTTTGCCTTTGATGGACATGTCTGGTAGTAGAGTAGAAAATTGTAGCAAATCAAGTGTTAATAAGATTTGGCCCGGTGAGAGGAAAGTGGATGTGTATGATGTTGATTTTGAAGTTTTCAGTAAAGCCATCATGGGAGGTTTTGTGCCTCCATTTGCATCATCGGATAATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGTTTTAAGGCGGAAAGTTCCGTCTACTAACGTGAAGGAGTTTATCTCAGCCCCTAAGTTATCCTCCTTACCACGGGTTTACTCAGATTCCATGTTGTGTATTCATACATCTGCAAATtcatctccatccttatcattgacgtcaacgtcatcgtctttatcatcatcctcgtcGCCCTCTTTTGTCTCTCCAGATTCCGTTTCTTCCGATTCTAGCACTCACTCAAAGTTATTCTTAGAATTGTCCCCTGATTCCTCCTCTCTAGTTTTTGCTCCTATTCCGGTATCTCCATCTTTGTCTAACTTCTCTAATTTGTCCCTCTTGTCAAATTCTAATTCTCAACCGGTGTCTAAGTGTAAAAATAATCATGGTGTCAAGTTATCACCACATCCATTTTCTCAGCCTGCCGCTTTACCATTGATAAAACCATCAACTTCCATTGCCGAACGCAGAGGTAGTTTATCTAAGTCTTTGAAGTTGCCGTTAATGAATGATAAGACACAAATAATAGATAAACCGTCAACTATTTGCGCCACTCGGGAACACAGTGTTCTCGCTAACAGCAACTTTAACTGTGTGCAAGATTCAAACAGTATAGATTATATTTTTGAGTCCACCAGCCATGTCAAAGGTGGGGGTGCGGATTCAATTCGACAATGCGAACTGGCAACACGCCCAGGCATAGTGGATATTGCAGGCTGCAAGGAATCATCGCTTCTGAGGAACTGTGTTGAGCCTTCTGTTGATAGTTTGTCAAGAGAAAATTTGAAGTTTACATCATCAAAGGGAGCTAATGAAAGTGGCTCGTTGCAGTGTAGTAAGGCACAAACTTTAGTATATTGCTGGCCCAGTTTAGAAAAGATTGATATTTTTGGTGCAAATCATTTAGATTCTGAGGCTGCTTTTGTCATATTCTCTCCAAATATACATACGCATGCAGGAAATGTCTTATATTTCTGGGTAGGGAGTTCTTTCAAACTGGATGCCTCACAGGTTTGGTTAGATAGTGATAGACAGACCAGTTTTGTTGGAGCAGTTGACTGGAACCGAATTGGTCGTGATCTCATAGCTCGGTTTAGTTTGCCAAAGAATACAGTCACTAAGATTGTTAAAGAGAACGAAGAACCACAAGAGTTACTCGCTTTGCTGAGTTCATTGTAG 2601 0.4114 MVGNDDARAPCHLSSSRKMFWRSASWSSARSSAANPSGEPESNFADPNSGPENSNRRFPPPPLTPRSQQNCKARSSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPTTPSGRGNNSNCNSNGERLKLDLSQIQQNNINNNHDSRNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVAKDREILKRNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSSNALDSRGAFIVHIPSAIYVWIGKNCEAIMERDARGAAGQIVRYERVQGSIIMIKEGEEPLSFWDAFSKFLPLMDMSGSRVENCSKSSVNKIWPGERKVDVYDVDFEVFSKAIMGGFVPPFASSDNEHETHLPARESSWSVLRRKVPSTNVKEFISAPKLSSLPRVYSDSMLCIHTSANSSPSLSLTSTSSSLSSSSSPSFVSPDSVSSDSSTHSKLFLELSPDSSSLVFAPIPVSPSLSNFSNLSLLSNSNSQPVSKCKNNHGVKLSPHPFSQPAALPLIKPSTSIAERRGSLSKSLKLPLMNDKTQIIDKPSTICATREHSVLANSNFNCVQDSNSIDYIFESTSHVKGGGADSIRQCELATRPGIVDIAGCKESSLLRNCVEPSVDSLSRENLKFTSSKGANESGSLQCSKAQTLVYCWPSLEKIDIFGANHLDSEAAFVIFSPNIHTHAGNVLYFWVGSSFKLDASQVWLDSDRQTSFVGAVDWNRIGRDLIARFSLPKNTVTKIVKENEEPQELLALLSSL 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00423 866 MobiDBLite consensus disorder prediction 92 125 - -
Car03g00423 866 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 859 - -
Car03g00423 866 SMART dsp_5 164 303 IPR020422 GO:0006470|GO:0008138
Car03g00423 866 SMART VILL_6 313 410 IPR007122 GO:0051015
Car03g00423 866 CDD DSP 165 299 - -
Car03g00423 866 Gene3D Protein tyrosine phosphatase superfamily 133 306 IPR029021 -
Car03g00423 866 MobiDBLite consensus disorder prediction 104 125 - -
Car03g00423 866 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 223 284 IPR000387 GO:0016311|GO:0016791
Car03g00423 866 ProSitePatterns Tyrosine specific protein phosphatases active site. 248 258 IPR016130 GO:0016311|GO:0016791
Car03g00423 866 Pfam Dual specificity phosphatase, catalytic domain 172 302 IPR000340 GO:0008138|GO:0016311
Car03g00423 866 MobiDBLite consensus disorder prediction 19 79 - -
Car03g00423 866 PANTHER MKPA PROTEIN 1 859 - -
Car03g00423 866 MobiDBLite consensus disorder prediction 19 53 - -
Car03g00423 866 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 159 305 IPR029021 -
Car03g00423 866 SUPERFAMILY Actin depolymerizing proteins 311 419 - -
Car03g00423 866 MobiDBLite consensus disorder prediction 520 546 - -
Car03g00423 866 Gene3D Severin 315 411 IPR029006 -
Car03g00423 866 ProSiteProfiles Dual specificity protein phosphatase domain profile. 164 306 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00423 Car-Chr3 18459396 18464698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00423 1 200 Protein tyrosine phosphatase (PTP) family AT3G55270 58.824 6.45e-64 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00423 - - mtr:MTR_7g023250 1333.16