Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car03g00394 | ATGAAAAATTCTCACAACTTTCATCACTCTACACTTCTCTTAACATTCCTACTATCATTCTCCTATCTCCTTTCATGTTTAGGAAACAATGACATAGCCATTCAACTAAATGATGATGTACTTGGTTTAATACTCTTCAAATCAGATCTCCATGACCCTTTTTCACATCTCTCATCATGGAATGAAGATGATGCAAATCCATGTTCATGGCAATACATAAAATGCAATCCACAAAACACAAGAGTTATTGAAGTTTCATTAGATGGTTTAAGTTTATCAGGTAAACTAGGAAGAGGTTTTGAAAAGTTGCAACATTTAGTTTCATTATCACTTTCTCATAACAATCTAAGTGGTAACATTAGTCCTTTTCTCACACTTTCAAATACTCTTCAAAAACTAAACCTAAGTCACAATTCATTTCATGGTGAAATTCCTATTTCATTCATCAATATGAGTTCAATAAGATTACTTGATCTTTCTCATAACTCATTCAATGGTCAAATTCATGAAACTTTCTTTGAGAATTGCTTTATGCTTCATCAACTTTCTTTGGCTAGAAATTTATTTGAAGGTGAAATTCCTATGAGTCTCTCTAAATGTTCTTTGTTGAATAGTCTTAACCTTTCCAATAATCTTTTTAGTGGAAATGTTGATTTCAACAAACTTTGGTCATTGAAAAGGCTTAGGAACATAGATCTATCCAACAATGGTTTATCAGGTAATTTGAATGATGGAATTTCATACATTCATAACTTGAAAGAGCTTTTTTTACAAAATAATCAGTTTTCAGGTTCTTTACCAAATGATATTGGATTATGTATTCATTTGAGTAAATTGGATTTAAGTACTAATCATTTTAGTGGTGAATTACCTGAATCAATTAAGAGATTAAGCTCTTTGAGTTATTTGAAGGTGTCTAATAATGTTTTGTTTGGTGAGTTTCCTCAATGGATTGGTAATTTGACTAGTTTGGAACATTTAGAGATTTCAAATAATGAGTTTTCTGGTTTGATTCCATATTCAATAGGTGAATTGAGATCATTGAGTTATTTAAGTGTTTCTAATAATAAGCTTGTTGGAAACATTCCTTTGTCAATTGTTTCATGCACAAAGCTGTGTGCGATGAAGTTTAGAGGTAATGGTTTTAATGGTACTATACCTGAGGGCTTGTTTGGATTAGGAGTAGAGGAAATGGATTTTTCCTATAATGAGTTTACAGGTAAAATTCCGGCAGGATTCAACAGGCTCTTAGAAACTCTGACGAAATTGGATTTATCAGATAATCATCTTGAAGGGAATGTTCCTGCAGAAATTGGCCTGCTTTCAAAGCTGAGATACTTGAATTTGTCTTGGAATGATTTTCATTCAAGGATGCCACCTGAGTTTGGTTTACTTCAGAATCTAAGAGTGTTGGATCTTCGGAATAGCGCGTTGTTTGGTTCGATTCCAGAAGGTACTTGTGATTCAGGAAATTTGGATGTTCTTCAACTTGATGGAAATTCATTGAAAGGGCCTATTCCTGAAGAGATTGGGAATTGTTCATCTCTTTACTTGTTGAGTTTGTCACACAACAATTTAACCGGTTCAATTCCAAAATCCATGTCAAAGCTAAACAAGCTCAAAATCCTCAAGTTGGAATTCAATGAACTAAGTGGAGAACTACCAATGGAGCTTGGAATGCTTCAAAATCTTCTAGCTGTAAACATATCACACAACAATCTCACAGGAAGACTTCCAACTAGTACAATTTTTCAAAACTTAGACAAAAGTTCATTGGAAGGAAACATTGGTCTTTGCTCACCCTTGTTGAAAGGTCCATGTATGATGAATGTTCCAAAACCTCTAGTTCTTGATCCACATGCAAATAACAACCAAATGGATCCTCAAAGAAATGAATCAACTATGTCTAGTTCATTTCATCACCACAGGTTCCTTAGCATTTCAGCTATTATAGCAATTTCTGCTTCTTTTGTCATTGTTTTAGGAGTTATTGCTATAACTCTACTCAATGTTTCTGTGAGAAGAAAACTTTCATTTGTTGATAATGCTTTGGAAAGCATGTGTTCAAGCTCTTCTAGATCAGGAGCACCAACCACAGGTAAACTCATTCTGTTTGATTCTCAATCATCGCCCGAATGGATAGCCAATCCAGATTCCTTGCTCAACAAGGCAACTCAAATTGGTGAAGGAGTTTTTGGAACAGTTTACAAAGTTCCATTAGGTTCATCATCACAGGGAAGAATGGTAGCAATCAAGAAACTTGTAACATCAAACATACTTCAATATCAAGAAGACTTTGATAGAGAAGTTAGGATCCTTGGAAAAGCAAGACACCCAAATTTAATAGCTTTGAAAGGATACTATTGGACTCCACAACTTCAACTTTTAGTATCTGAATTTGCACCAAATGGTAACTTGCAATCCAAGTTACATGAAAGACTACCTTCAAATCCACCACTTTCTTGGCCTATTAGATTCAAAATTTTGCTTGGAACAGCTAAAGGACTAGCCCATTTGCACCATTCATTTAGACCATCAATAATTCACTACAACATAAAACCAAGTAACATCTTACTTGATGAAAACTTCAACCCCAAGTTATCTGATTTCGGATTAGCTAGGCTTCTTACAAAAGTTGAAAAGCATGTTATGAGCAATAGGTTTCAAAGTGCTTTGGGGTATGTGGCACCTGAATTGGCTTGTCAAAGCTTAAGGGTCAATGAGAAATGTGATGTGTATGGTTTTGGTGTGATGATACTTGAGTTAGTGACAGGTAGGAGGCCAGTGGAGTATGGTGAAGATAATGTGTTGATATTGAATGATCATGTGAGGGTTTTGCTTGAACATGGTAATGTTTTGGATTGTGTGGATCCTAATTTGATGAATGAGTATCCTGAGGATGAAGTTTTGCCAGTTTTGAAGCTGGCTATGGTTTGCACTTCTCAGATACCATCTAGCAGGCCTAGTATGGCAGAAGTTGTGCAAATATTGCAGGTCATCAAAACTCCAGTTCCTCAGAGGATGGAAGTATATTGA | 3036 | 0.3508 | MKNSHNFHHSTLLLTFLLSFSYLLSCLGNNDIAIQLNDDVLGLILFKSDLHDPFSHLSSWNEDDANPCSWQYIKCNPQNTRVIEVSLDGLSLSGKLGRGFEKLQHLVSLSLSHNNLSGNISPFLTLSNTLQKLNLSHNSFHGEIPISFINMSSIRLLDLSHNSFNGQIHETFFENCFMLHQLSLARNLFEGEIPMSLSKCSLLNSLNLSNNLFSGNVDFNKLWSLKRLRNIDLSNNGLSGNLNDGISYIHNLKELFLQNNQFSGSLPNDIGLCIHLSKLDLSTNHFSGELPESIKRLSSLSYLKVSNNVLFGEFPQWIGNLTSLEHLEISNNEFSGLIPYSIGELRSLSYLSVSNNKLVGNIPLSIVSCTKLCAMKFRGNGFNGTIPEGLFGLGVEEMDFSYNEFTGKIPAGFNRLLETLTKLDLSDNHLEGNVPAEIGLLSKLRYLNLSWNDFHSRMPPEFGLLQNLRVLDLRNSALFGSIPEGTCDSGNLDVLQLDGNSLKGPIPEEIGNCSSLYLLSLSHNNLTGSIPKSMSKLNKLKILKLEFNELSGELPMELGMLQNLLAVNISHNNLTGRLPTSTIFQNLDKSSLEGNIGLCSPLLKGPCMMNVPKPLVLDPHANNNQMDPQRNESTMSSSFHHHRFLSISAIIAISASFVIVLGVIAITLLNVSVRRKLSFVDNALESMCSSSSRSGAPTTGKLILFDSQSSPEWIANPDSLLNKATQIGEGVFGTVYKVPLGSSSQGRMVAIKKLVTSNILQYQEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVSEFAPNGNLQSKLHERLPSNPPLSWPIRFKILLGTAKGLAHLHHSFRPSIIHYNIKPSNILLDENFNPKLSDFGLARLLTKVEKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEHGNVLDCVDPNLMNEYPEDEVLPVLKLAMVCTSQIPSSRPSMAEVVQILQVIKTPVPQRMEVY | 1011 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car03g00394 | 1011 | Gene3D | Ribonuclease Inhibitor | 316 | 394 | IPR032675 | - | |
Car03g00394 | 1011 | CDD | STKc_IRAK | 727 | 998 | - | - | |
Car03g00394 | 1011 | ProSitePatterns | Protein kinases ATP-binding region signature. | 727 | 753 | IPR017441 | GO:0005524 | |
Car03g00394 | 1011 | ProSiteProfiles | Leucine-rich repeat profile. | 105 | 127 | IPR001611 | GO:0005515 | |
Car03g00394 | 1011 | Gene3D | Ribonuclease Inhibitor | 395 | 612 | IPR032675 | - | |
Car03g00394 | 1011 | SUPERFAMILY | Protein kinase-like (PK-like) | 722 | 1001 | IPR011009 | - | |
Car03g00394 | 1011 | ProSiteProfiles | Protein kinase domain profile. | 721 | 1000 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car03g00394 | 1011 | Pfam | Leucine rich repeat | 299 | 358 | IPR001611 | GO:0005515 | |
Car03g00394 | 1011 | Pfam | Leucine rich repeat | 491 | 550 | IPR001611 | GO:0005515 | |
Car03g00394 | 1011 | SUPERFAMILY | L domain-like | 49 | 390 | - | - | |
Car03g00394 | 1011 | Gene3D | Transferase(Phosphotransferase) domain 1 | 801 | 1008 | - | - | |
Car03g00394 | 1011 | Pfam | Protein kinase domain | 723 | 995 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car03g00394 | 1011 | PANTHER | BNAA09G02190D PROTEIN | 12 | 1009 | - | - | |
Car03g00394 | 1011 | Gene3D | Phosphorylase Kinase; domain 1 | 708 | 800 | - | - | |
Car03g00394 | 1011 | ProSiteProfiles | Leucine-rich repeat profile. | 251 | 273 | IPR001611 | GO:0005515 | |
Car03g00394 | 1011 | Gene3D | Ribonuclease Inhibitor | 196 | 315 | IPR032675 | - | |
Car03g00394 | 1011 | SUPERFAMILY | L domain-like | 396 | 600 | - | - | |
Car03g00394 | 1011 | Pfam | Leucine rich repeat N-terminal domain | 37 | 76 | IPR013210 | - | |
Car03g00394 | 1011 | Gene3D | Ribonuclease Inhibitor | 37 | 195 | IPR032675 | - | |
Car03g00394 | 1011 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 12 | 1009 | - | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 151 | 175 | IPR003591 | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 345 | 369 | IPR003591 | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 561 | 586 | IPR003591 | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 441 | 464 | IPR003591 | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 249 | 273 | IPR003591 | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 417 | 440 | IPR003591 | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 321 | 344 | IPR003591 | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 465 | 489 | IPR003591 | - | |
Car03g00394 | 1011 | SMART | LRR_typ_2 | 103 | 127 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car03g00394 | Car-Chr3 | 17222712 | 17226985 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car03g00394 | 14 | 1008 | Receptor kinase-like Gene Family | AT3G28040 | 62.823 | 0.0 | 1236 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-1 | Car03g00394 | Pkinase | 4e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car03g00394 | - | - | gmx:100795810 | 1559.66 |