Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00394 ATGAAAAATTCTCACAACTTTCATCACTCTACACTTCTCTTAACATTCCTACTATCATTCTCCTATCTCCTTTCATGTTTAGGAAACAATGACATAGCCATTCAACTAAATGATGATGTACTTGGTTTAATACTCTTCAAATCAGATCTCCATGACCCTTTTTCACATCTCTCATCATGGAATGAAGATGATGCAAATCCATGTTCATGGCAATACATAAAATGCAATCCACAAAACACAAGAGTTATTGAAGTTTCATTAGATGGTTTAAGTTTATCAGGTAAACTAGGAAGAGGTTTTGAAAAGTTGCAACATTTAGTTTCATTATCACTTTCTCATAACAATCTAAGTGGTAACATTAGTCCTTTTCTCACACTTTCAAATACTCTTCAAAAACTAAACCTAAGTCACAATTCATTTCATGGTGAAATTCCTATTTCATTCATCAATATGAGTTCAATAAGATTACTTGATCTTTCTCATAACTCATTCAATGGTCAAATTCATGAAACTTTCTTTGAGAATTGCTTTATGCTTCATCAACTTTCTTTGGCTAGAAATTTATTTGAAGGTGAAATTCCTATGAGTCTCTCTAAATGTTCTTTGTTGAATAGTCTTAACCTTTCCAATAATCTTTTTAGTGGAAATGTTGATTTCAACAAACTTTGGTCATTGAAAAGGCTTAGGAACATAGATCTATCCAACAATGGTTTATCAGGTAATTTGAATGATGGAATTTCATACATTCATAACTTGAAAGAGCTTTTTTTACAAAATAATCAGTTTTCAGGTTCTTTACCAAATGATATTGGATTATGTATTCATTTGAGTAAATTGGATTTAAGTACTAATCATTTTAGTGGTGAATTACCTGAATCAATTAAGAGATTAAGCTCTTTGAGTTATTTGAAGGTGTCTAATAATGTTTTGTTTGGTGAGTTTCCTCAATGGATTGGTAATTTGACTAGTTTGGAACATTTAGAGATTTCAAATAATGAGTTTTCTGGTTTGATTCCATATTCAATAGGTGAATTGAGATCATTGAGTTATTTAAGTGTTTCTAATAATAAGCTTGTTGGAAACATTCCTTTGTCAATTGTTTCATGCACAAAGCTGTGTGCGATGAAGTTTAGAGGTAATGGTTTTAATGGTACTATACCTGAGGGCTTGTTTGGATTAGGAGTAGAGGAAATGGATTTTTCCTATAATGAGTTTACAGGTAAAATTCCGGCAGGATTCAACAGGCTCTTAGAAACTCTGACGAAATTGGATTTATCAGATAATCATCTTGAAGGGAATGTTCCTGCAGAAATTGGCCTGCTTTCAAAGCTGAGATACTTGAATTTGTCTTGGAATGATTTTCATTCAAGGATGCCACCTGAGTTTGGTTTACTTCAGAATCTAAGAGTGTTGGATCTTCGGAATAGCGCGTTGTTTGGTTCGATTCCAGAAGGTACTTGTGATTCAGGAAATTTGGATGTTCTTCAACTTGATGGAAATTCATTGAAAGGGCCTATTCCTGAAGAGATTGGGAATTGTTCATCTCTTTACTTGTTGAGTTTGTCACACAACAATTTAACCGGTTCAATTCCAAAATCCATGTCAAAGCTAAACAAGCTCAAAATCCTCAAGTTGGAATTCAATGAACTAAGTGGAGAACTACCAATGGAGCTTGGAATGCTTCAAAATCTTCTAGCTGTAAACATATCACACAACAATCTCACAGGAAGACTTCCAACTAGTACAATTTTTCAAAACTTAGACAAAAGTTCATTGGAAGGAAACATTGGTCTTTGCTCACCCTTGTTGAAAGGTCCATGTATGATGAATGTTCCAAAACCTCTAGTTCTTGATCCACATGCAAATAACAACCAAATGGATCCTCAAAGAAATGAATCAACTATGTCTAGTTCATTTCATCACCACAGGTTCCTTAGCATTTCAGCTATTATAGCAATTTCTGCTTCTTTTGTCATTGTTTTAGGAGTTATTGCTATAACTCTACTCAATGTTTCTGTGAGAAGAAAACTTTCATTTGTTGATAATGCTTTGGAAAGCATGTGTTCAAGCTCTTCTAGATCAGGAGCACCAACCACAGGTAAACTCATTCTGTTTGATTCTCAATCATCGCCCGAATGGATAGCCAATCCAGATTCCTTGCTCAACAAGGCAACTCAAATTGGTGAAGGAGTTTTTGGAACAGTTTACAAAGTTCCATTAGGTTCATCATCACAGGGAAGAATGGTAGCAATCAAGAAACTTGTAACATCAAACATACTTCAATATCAAGAAGACTTTGATAGAGAAGTTAGGATCCTTGGAAAAGCAAGACACCCAAATTTAATAGCTTTGAAAGGATACTATTGGACTCCACAACTTCAACTTTTAGTATCTGAATTTGCACCAAATGGTAACTTGCAATCCAAGTTACATGAAAGACTACCTTCAAATCCACCACTTTCTTGGCCTATTAGATTCAAAATTTTGCTTGGAACAGCTAAAGGACTAGCCCATTTGCACCATTCATTTAGACCATCAATAATTCACTACAACATAAAACCAAGTAACATCTTACTTGATGAAAACTTCAACCCCAAGTTATCTGATTTCGGATTAGCTAGGCTTCTTACAAAAGTTGAAAAGCATGTTATGAGCAATAGGTTTCAAAGTGCTTTGGGGTATGTGGCACCTGAATTGGCTTGTCAAAGCTTAAGGGTCAATGAGAAATGTGATGTGTATGGTTTTGGTGTGATGATACTTGAGTTAGTGACAGGTAGGAGGCCAGTGGAGTATGGTGAAGATAATGTGTTGATATTGAATGATCATGTGAGGGTTTTGCTTGAACATGGTAATGTTTTGGATTGTGTGGATCCTAATTTGATGAATGAGTATCCTGAGGATGAAGTTTTGCCAGTTTTGAAGCTGGCTATGGTTTGCACTTCTCAGATACCATCTAGCAGGCCTAGTATGGCAGAAGTTGTGCAAATATTGCAGGTCATCAAAACTCCAGTTCCTCAGAGGATGGAAGTATATTGA 3036 0.3508 MKNSHNFHHSTLLLTFLLSFSYLLSCLGNNDIAIQLNDDVLGLILFKSDLHDPFSHLSSWNEDDANPCSWQYIKCNPQNTRVIEVSLDGLSLSGKLGRGFEKLQHLVSLSLSHNNLSGNISPFLTLSNTLQKLNLSHNSFHGEIPISFINMSSIRLLDLSHNSFNGQIHETFFENCFMLHQLSLARNLFEGEIPMSLSKCSLLNSLNLSNNLFSGNVDFNKLWSLKRLRNIDLSNNGLSGNLNDGISYIHNLKELFLQNNQFSGSLPNDIGLCIHLSKLDLSTNHFSGELPESIKRLSSLSYLKVSNNVLFGEFPQWIGNLTSLEHLEISNNEFSGLIPYSIGELRSLSYLSVSNNKLVGNIPLSIVSCTKLCAMKFRGNGFNGTIPEGLFGLGVEEMDFSYNEFTGKIPAGFNRLLETLTKLDLSDNHLEGNVPAEIGLLSKLRYLNLSWNDFHSRMPPEFGLLQNLRVLDLRNSALFGSIPEGTCDSGNLDVLQLDGNSLKGPIPEEIGNCSSLYLLSLSHNNLTGSIPKSMSKLNKLKILKLEFNELSGELPMELGMLQNLLAVNISHNNLTGRLPTSTIFQNLDKSSLEGNIGLCSPLLKGPCMMNVPKPLVLDPHANNNQMDPQRNESTMSSSFHHHRFLSISAIIAISASFVIVLGVIAITLLNVSVRRKLSFVDNALESMCSSSSRSGAPTTGKLILFDSQSSPEWIANPDSLLNKATQIGEGVFGTVYKVPLGSSSQGRMVAIKKLVTSNILQYQEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVSEFAPNGNLQSKLHERLPSNPPLSWPIRFKILLGTAKGLAHLHHSFRPSIIHYNIKPSNILLDENFNPKLSDFGLARLLTKVEKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEHGNVLDCVDPNLMNEYPEDEVLPVLKLAMVCTSQIPSSRPSMAEVVQILQVIKTPVPQRMEVY 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00394 1011 Gene3D Ribonuclease Inhibitor 316 394 IPR032675 -
Car03g00394 1011 CDD STKc_IRAK 727 998 - -
Car03g00394 1011 ProSitePatterns Protein kinases ATP-binding region signature. 727 753 IPR017441 GO:0005524
Car03g00394 1011 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Car03g00394 1011 Gene3D Ribonuclease Inhibitor 395 612 IPR032675 -
Car03g00394 1011 SUPERFAMILY Protein kinase-like (PK-like) 722 1001 IPR011009 -
Car03g00394 1011 ProSiteProfiles Protein kinase domain profile. 721 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00394 1011 Pfam Leucine rich repeat 299 358 IPR001611 GO:0005515
Car03g00394 1011 Pfam Leucine rich repeat 491 550 IPR001611 GO:0005515
Car03g00394 1011 SUPERFAMILY L domain-like 49 390 - -
Car03g00394 1011 Gene3D Transferase(Phosphotransferase) domain 1 801 1008 - -
Car03g00394 1011 Pfam Protein kinase domain 723 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00394 1011 PANTHER BNAA09G02190D PROTEIN 12 1009 - -
Car03g00394 1011 Gene3D Phosphorylase Kinase; domain 1 708 800 - -
Car03g00394 1011 ProSiteProfiles Leucine-rich repeat profile. 251 273 IPR001611 GO:0005515
Car03g00394 1011 Gene3D Ribonuclease Inhibitor 196 315 IPR032675 -
Car03g00394 1011 SUPERFAMILY L domain-like 396 600 - -
Car03g00394 1011 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Car03g00394 1011 Gene3D Ribonuclease Inhibitor 37 195 IPR032675 -
Car03g00394 1011 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 1009 - -
Car03g00394 1011 SMART LRR_typ_2 151 175 IPR003591 -
Car03g00394 1011 SMART LRR_typ_2 345 369 IPR003591 -
Car03g00394 1011 SMART LRR_typ_2 561 586 IPR003591 -
Car03g00394 1011 SMART LRR_typ_2 441 464 IPR003591 -
Car03g00394 1011 SMART LRR_typ_2 249 273 IPR003591 -
Car03g00394 1011 SMART LRR_typ_2 417 440 IPR003591 -
Car03g00394 1011 SMART LRR_typ_2 321 344 IPR003591 -
Car03g00394 1011 SMART LRR_typ_2 465 489 IPR003591 -
Car03g00394 1011 SMART LRR_typ_2 103 127 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00394 Car-Chr3 17222712 17226985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00394 14 1008 Receptor kinase-like Gene Family AT3G28040 62.823 0.0 1236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Car03g00394 Pkinase 4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00394 - - gmx:100795810 1559.66