Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00382 ATGACTCAGGCTGTGGAAGTATTGAATCGGTATGGAACGGATCTGGTAGGAGAAGGGAGAGGTTCAGATTCGGAGTGTTTAGCAGGTTTTGAGTGTTTTCTGAACATTGTGAGGGCACTGGGAATGGGATCTTGTATATCTGAGGTTGGTGCTGGTGGTTCACCTCCTCTGCTATCTTATTTGCCGGAATCGAATGTAGATGGTGGGAAGAGAAGAAGGTTAAGGGGTTCTTCTTCCTTTGATTATAAAATACCTGGGAGAATGTTTTTAAATGGGTCAAGTGATATTGCTTCTATGTATTGTAAGCAAGGTAGAAAAGGAATTAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAATGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCGAAGAAAGTTAGGGATTCTTTCCCTTTAAAGCTTAGTGCACAATGGGATTTCCATCGTAAGAATAAAGATGGATTCAGTAATCATAATGGTGCAGCCACAAGTTATACTTCTGAAGAGCAAACTCGACTGGTTGAAGAGAAACCCAGTCATTCTGATCATGAGTTTGATGGAACAAATGCTATCTTGACACTAAGAGAATCTTTTTTGAAGGCTAGTAAGATTATGGACAAAGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTTACCTTGATCAAGCAGGGACTGAATCTTGTTGTTGGAAATGTGGGGGATTCAAGAGCTGTATTAGGAACCCGAGATCATGAGGATTCTCTTATTGCTGTTCAGTTGACTATCGACCTTAAGCCTAATCTTCCAAAGGAAGAAGAGAGGATTAGGCTCCGCAAAGGAAGAGTTTTTTCCCTTCCGAATGAACACGAGGTACCTCGAGTTTGGCTGCCTAATACTGATTTCCCAGGTCTGGCCATGGCACGGGCTTTTGGAGACTTTTGCCTAAAGGACTTTGGATTGATTTCTGTTCCAGATGTCTCATATCACCGCCTTACAGAGAAGGATGAATTTGTTGTGTTAGCAACTGATGGGATTTGGGATGTTTTATCAAACGAAGAAGTTGTGGAAATTGTGGCATCTGCGCCGCGGCCTACTGCTGCTCGATTACTGGTTGAGTCGGCTGTTCATGGTTGGAGGACAAAATTCCCTTTCTGTAAGGTTGACGATTGTGCTGCAGTGTGCCTCTTCTTAGATTCAAATTCAGAATCCAAGGCAGAACATACCACAGACAAATCGATGCCTCTACCAGAAGCATCAACCGACCTAGTCGATCAATCACCTCTACCTGGTGAGAAAGGAATCGGAACAGAAGCCGAAAAACAGCAGGGGTAG 1368 0.4313 MTQAVEVLNRYGTDLVGEGRGSDSECLAGFECFLNIVRALGMGSCISEVGAGGSPPLLSYLPESNVDGGKRRRLRGSSSFDYKIPGRMFLNGSSDIASMYCKQGRKGINQDAMLVWENFCSNEDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLSAQWDFHRKNKDGFSNHNGAATSYTSEEQTRLVEEKPSHSDHEFDGTNAILTLRESFLKASKIMDKELKLHPDIDCFCSGTTAVTLIKQGLNLVVGNVGDSRAVLGTRDHEDSLIAVQLTIDLKPNLPKEEERIRLRKGRVFSLPNEHEVPRVWLPNTDFPGLAMARAFGDFCLKDFGLISVPDVSYHRLTEKDEFVVLATDGIWDVLSNEEVVEIVASAPRPTAARLLVESAVHGWRTKFPFCKVDDCAAVCLFLDSNSESKAEHTTDKSMPLPEASTDLVDQSPLPGEKGIGTEAEKQQG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00382 455 MobiDBLite consensus disorder prediction 415 455 - -
Car03g00382 455 Gene3D - 93 418 IPR036457 -
Car03g00382 455 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 417 - -
Car03g00382 455 CDD PP2Cc 96 409 IPR001932 -
Car03g00382 455 MobiDBLite consensus disorder prediction 182 196 - -
Car03g00382 455 PANTHER ALPHABET, ISOFORM E-RELATED 42 417 - -
Car03g00382 455 SUPERFAMILY PP2C-like 95 411 IPR036457 -
Car03g00382 455 SMART PP2C_4 86 407 IPR001932 -
Car03g00382 455 MobiDBLite consensus disorder prediction 165 197 - -
Car03g00382 455 Pfam Protein phosphatase 2C 178 372 IPR001932 -
Car03g00382 455 ProSiteProfiles PPM-type phosphatase domain profile. 96 409 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00382 Car-Chr3 16952739 16958076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00382 69 413 PP2C-type Phosphatase Gene Family AT1G16220 58.405 4.70e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00382 - - gmx:100810538 754.977