Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00378 ATGACCATGGTTCCTTCTCAAACCAACAACAAACAAAATAATAATGGTGATTGTGTTTTCTACAACAACTCAACAAGTGCTATGAACCAATTTCAATTTGTTGAAGGCTACAACTACAATAATTATTTAAGATCTGAATTTGTGGTGAGGCATATGGCTGAGGAGGAATCATCATCAATAATCAAAACCATCTCTACCACTCACCACCAaaccgaatctcaacctgaacctgaacccgaaGTAGAAAACATTTCTACCacaaaagaagaagaagaaaaagaaacagaagcaaacaataacaacaacaacaataaCTGGCTTCAATTAAGCATAGGTTTTAATCAGAGTAACACGAACGTGACAACAACTACAAATCACGACCGTGATCACCATCATCAAGCTCCAACCAGCAGTTCAAGACTGTTGGAGCTTGATTTGTTACCAAAGAATCGGGCTTCTTCACGACCCAATTTGGAGCAACCAACGACAAGGGGTTGCTCATCGTTTGGCTCTTCTTTGCTATTTGAACAAACAACATCATCTTCTTCATCTTCATCCATGTCCATGTCCATGCCAAGTGGTCCAACATATGGTcatcaacaacaacaacatcaaaatcaaAATCTATGGACATTTGGTCCATTACTACCTCATTCTATAGCAATTATGCCTTCTTCAACATCATATATACCCTCTTATTCTTCATCACAATCTTGTTCTTCTTTGAGGCCTAATTTAGGACCTTATAATTATCCTTTTTACCAAAATGCACCCTTTCACTTTCcttcgtcatcttcatcttcttcttcCGGGTTCGACCAATTCGATGTGGCCGGACCTAGCTCATCTCATGTCGCTTTTCGAGTTGTTGATCCTCCTCGTAGACCTCATTCTGGAATATGGTTTATGCTACAAGCTTCACAAAATCAAGTGAAAGAACCGTTCTTGCCACAAATACCTAAGAACTATCTTAGAATCAAAGATGGAAGGATGACAGTTCGGTTGCTATTGAAGTATTTGGTTAGCAAACTCAAATTGGAGAGCGAATCAGAGATAGAGATAACATGCAAAGGACAACAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGAGATAACATTTGGACACCAAGGGACACTACAAGATCTTTGCTTTCAGATTCCTCAACAACAGATCATGTAATGGTGCTTCATTATGGTAGAAGCACTTCTTAA 1215 0.3481 MTMVPSQTNNKQNNNGDCVFYNNSTSAMNQFQFVEGYNYNNYLRSEFVVRHMAEEESSSIIKTISTTHHQTESQPEPEPEVENISTTKEEEEKETEANNNNNNNNWLQLSIGFNQSNTNVTTTTNHDRDHHHQAPTSSSRLLELDLLPKNRASSRPNLEQPTTRGCSSFGSSLLFEQTTSSSSSSSMSMSMPSGPTYGHQQQQHQNQNLWTFGPLLPHSIAIMPSSTSYIPSYSSSQSCSSLRPNLGPYNYPFYQNAPFHFPSSSSSSSSGFDQFDVAGPSSSHVAFRVVDPPRRPHSGIWFMLQASQNQVKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLKLESESEIEITCKGQQLLPFLTLQHVRDNIWTPRDTTRSLLSDSSTTDHVMVLHYGRSTS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00378 404 MobiDBLite consensus disorder prediction 153 204 - -
Car03g00378 404 MobiDBLite consensus disorder prediction 82 97 - -
Car03g00378 404 MobiDBLite consensus disorder prediction 65 81 - -
Car03g00378 404 MobiDBLite consensus disorder prediction 98 123 - -
Car03g00378 404 Gene3D - 294 399 - -
Car03g00378 404 PANTHER RING FINGER PROTEIN 1 402 IPR044171 GO:0007275
Car03g00378 404 PANTHER RING FINGER PROTEIN 1 402 - -
Car03g00378 404 MobiDBLite consensus disorder prediction 65 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00378 Car-Chr3 16682316 16693538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00378 313 399 C3H Transcription Factor Family AT3G23060 38.462 9.49e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00378 - - mtr:MTR_7g021270 385.571