Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00347 ATGGATAAATATGATTTCAATAAGTTGAGTGAATATGCTTATGATCTTAAGGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTGGATGGTTTTGAGAATACAACAACTAAAGCTGGTGAAATTATGGCTAAGGCTTTGAACACTTCTTTGGAATTAAGTAGTAATTCTTTGGACATTATTAATGCTGTTTCTAGCTTACTTAAGGATGTTGGTGACAATAATGTTAATGTAAATCTTAATAGGAGGCTTTTGTCTAATGATGGTTTTCCTTCTTGGGTTAGTGAAGGGCAAAGACATCTTTTGATGGAAGGAAATTTTAAGCCAAATGTTGTTGTGGCTCAAGATGGTAGTGGACAATTTAAGACATTAAGTGAAGCTCTTTTGACAGTTCCTTCTTATAATGCACAACCTTTTGTGATTTATGTTAAGGCTGGTATTTATAATGAGAATGTTAATGTGCTGAAGGAAATTACTCATGTTACTATCATTGGTGATGGTCCTACAAAGACTAGATTCACTGCTAGCCTTAACTATGTTGATGGTGTCCAAACTTACAACACTGCAACTTTTGGTGTAAATGGTGCAAACTTCATGGCAAAAGATGTTGGATTTGAGAACACAGCAGGAGCAGAGAAACATCAAGCAGTAGCACTACGAGTAACAGCAGATCAAGCAGTATTCTACAACTTTCAAATGGATGAACCAGCAAACCATAGTCTTGAGGATGCACAAGCACCGCAAATCAATTCATCTGAAACCACACTTGAAGAAGTCTTAGCAGTTCCAGAGGAAAATGGGAATGACAATGTATCCAATACAGAAGATTTGGAAGTTATTACATGTGAAGAAAAGAATTCAGAGGAAGCTAAAGAACCCCATAATGCACAAAACACAGAAAAGAAGGTACCGGGAAAAGAAAGCTACAAAGTCAAGGCAAAAGTAGAGGTGTTGACCCAGCTCTCTTTTTCAAAGATGAAGCAGTTATTAACAGTATAA 1005 0.3622 MDKYDFNKLSEYAYDLKVWLTGTLSHQQTCLDGFENTTTKAGEIMAKALNTSLELSSNSLDIINAVSSLLKDVGDNNVNVNLNRRLLSNDGFPSWVSEGQRHLLMEGNFKPNVVVAQDGSGQFKTLSEALLTVPSYNAQPFVIYVKAGIYNENVNVLKEITHVTIIGDGPTKTRFTASLNYVDGVQTYNTATFGVNGANFMAKDVGFENTAGAEKHQAVALRVTADQAVFYNFQMDEPANHSLEDAQAPQINSSETTLEEVLAVPEENGNDNVSNTEDLEVITCEEKNSEEAKEPHNAQNTEKKVPGKESYKVKAKVEVLTQLSFSKMKQLLTV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00347 334 Pfam Pectinesterase 112 236 IPR000070 GO:0030599|GO:0042545
Car03g00347 334 Pfam Plant invertase/pectin methylesterase inhibitor 8 62 IPR006501 GO:0004857
Car03g00347 334 Gene3D - 106 240 IPR012334 -
Car03g00347 334 PANTHER PECTINESTERASE 2 236 - -
Car03g00347 334 CDD PMEI-like_3 1 68 - -
Car03g00347 334 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 13 66 IPR035513 -
Car03g00347 334 ProSitePatterns Pectinesterase signature 1. 137 156 IPR018040 -
Car03g00347 334 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 67 IPR035513 -
Car03g00347 334 PANTHER PECTINESTERASE 2 236 - -
Car03g00347 334 MobiDBLite consensus disorder prediction 287 310 - -
Car03g00347 334 SUPERFAMILY Pectin lyase-like 110 236 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00347 Car-Chr3 8381523 8383024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00347 1 236 Carbohydrate Esterase AT5G49180 54.132 8.08e-82 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00347 K01051 - gmx:100784682 339.347