Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00344 ATGGCTTTAGATCAACCCTCAAATCCTAATTCCGTCGACGGCGAAGGTAACGGTAATGATAATGGTAACGGAACGCCACCGTCGGCCACCGTTAACGGCGGCGAAGATGGGAGGCCAGCGGCGAGGCTGCCACGTTGGACGAGACAGGAAATTCTGGTTCTGATTCAAGGAAAGAGCGATGCGGAGAGCCGGTTCAAACCGGGTCGAAACGGTGCGGGATTCGGTTCGAGTGAACCGAAGTGGGCGTTGGTTTCTTCGTACTGTATGAAACATGGTGTCAACCGTGGTCCGATTCAGTGTCGGAAGCGGTGGAGCAATCTCGCCGGAGATTATAAGAAGATTAAAGAGTGGGAATCTCAGGTGAGAGATGAAACGGAATCGTTTTGGTTGATGAGGAATGATTTGAGGAGAGAAAGGAAATTGCCTGGTTATTTTGATCGGGAAGTTTATGATATTTTAGATTCGCCGTCGGTTGCGGCGGCGGCAACGGCGGCAATGGTTGCTCCGATCGATGTGAAGGTTTCGGAGGCGGTTGGTGATGAGGAGGTGCATCTTTATGATAGTAATCGGAAAGTTAGTGGTGAAGATGGGTTGTTTTCGGATTTTGAGAGGGATGAGATTTTGGTTCCTACCAAAGATGTTCATGTTCCTTCACCTGTTCCTATCTCAGAGAAGCAGTATCTGCCACTACTCCATGGCTGCAAAGGGGATGGCAATGCTCAAGGTGCTAACAATGAGAAACAACCAGCCACAAATCCAGGAATGGGTTCTACATCTCAAGGGGAACGAAAGAGGAAACGGTTTGCAACCGACGGAGATGAAGAGGAGGAAACTTTGCAAAGTCAATTAATTGACGTGTTAGAGAAAAACGGCGAGATGCTACGCGAACAACTAGAGGCTCAGAACATGAATTTTCAGCTGGATCGCCAGCACCAGAATGACACTGCAAGTAACATAGTTGCTGTGCTTGATAAGCTTGCAAATGCTCTTGGGAGAATTGCTGATAAATTGTAG 1014 0.4822 MALDQPSNPNSVDGEGNGNDNGNGTPPSATVNGGEDGRPAARLPRWTRQEILVLIQGKSDAESRFKPGRNGAGFGSSEPKWALVSSYCMKHGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDREVYDILDSPSVAAAATAAMVAPIDVKVSEAVGDEEVHLYDSNRKVSGEDGLFSDFERDEILVPTKDVHVPSPVPISEKQYLPLLHGCKGDGNAQGANNEKQPATNPGMGSTSQGERKRKRFATDGDEEEETLQSQLIDVLEKNGEMLREQLEAQNMNFQLDRQHQNDTASNIVAVLDKLANALGRIADKL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00344 337 MobiDBLite consensus disorder prediction 1 30 - -
Car03g00344 337 ProSiteProfiles Myb-like domain profile. 38 108 IPR001005 -
Car03g00344 337 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 337 - -
Car03g00344 337 CDD GT1 44 115 - -
Car03g00344 337 MobiDBLite consensus disorder prediction 260 274 - -
Car03g00344 337 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 337 - -
Car03g00344 337 Gene3D - 46 113 - -
Car03g00344 337 MobiDBLite consensus disorder prediction 241 259 - -
Car03g00344 337 MobiDBLite consensus disorder prediction 1 44 - -
Car03g00344 337 Coils Coil 284 304 - -
Car03g00344 337 Pfam Myb/SANT-like DNA-binding domain 45 131 IPR044822 -
Car03g00344 337 MobiDBLite consensus disorder prediction 233 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00344 Car-Chr3 8279445 8283478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00344 28 116 Trihelix Transcription Factor Family AT1G76880 30.435 5.68e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car03g00344 Myb_DNA-bind_4 2.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00344 - - cam:101510442 674.085