Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00342 ATGTTTCATAAAAAACACACCTTTTTCCTTCTTTTGTTGTTGTTTAGTTTGAATCATAACACTGTGCAATGCCAAGGAAGATTGAGTAAACACATAGCTTATGAGTCTCCATCACCATCATCAAATTACAAAGATGATTCTAGGAAGATAATTTTCAGTATAGTTTTAGGAGCAACCACTGGACTAATAGGTTCAATTCTGTTTGCATTTATAGTTCGTTGTGTTGTTCAATATCTAAATAGAACACCAATCCTCAAAGGACCTGTGATATTCTCACCAAAGATTGCACCAAAGACACTTCAATCAGCTTTAACAAAAGAAAACACTTTGCTTGGTTCAAGTCCAAATGGAAAATACTACAAAACAGTTCTTGAGAATGGTTTAACAATTGCTGTCAAAAGGGTCACACCCTTTGAGGGAAATTCACAAGAGAGTAGGAGAAAATCAGTGAAGAGGGGAATTCAATTGGAGCTTGAGCTTCTAGCTAGCTTAAGACATAGGAATTTGATGAGTTTGAGAGCCTACGTCCGCGAAAACGACGGGTTTTCGTTGGTTTATGATTATGTTTCAACTGGTAGTCTTGCCGATGTGATGAATAGAGTTAGGGAAAATGAGTTGATGCTTGGTTGGGAAGTTAGGTTAAGGATTGCTGTTGGTGTTGTGAAGGGACTTCAATATCTTCATTTCACTTGTGTGCCTCAGATTCTGCATTTTAATTTGAAGCTTACAAATGTTATGTTGGATGGTGAGTTTGAACCTAGGTTGGCTGATTATGGTTTGGCTAAACTTCTACCAAATTTGGATAGAGGGGTTTCTGTCAACAGCCCTCCGGAATGTTTCCATAATTGCAGCAGGTACACAGAAAAAAGTGACATATTCAGTTTTGGCACGATACTAGGCGTTTTATTAACCGGTAAGGACCCTACCGATCCATTCTTTGGAGAGCCCTCCCGAGGAGGAAGTTTAGGAAGTTGGCTACGGCACTTGAAGCAAGCCGGTGAGGAACGAGAAGCTATAGATAAGAGTATTTTAGGCGAACAAGGCGAAGAAGATGAGATGCTAATGGCTGTTGGGATTGCTGCTGCATGTTTATCGGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTGTTCACATGCTAACACAACTCAATAGTTTTTGA 1164 0.3969 MFHKKHTFFLLLLLFSLNHNTVQCQGRLSKHIAYESPSPSSNYKDDSRKIIFSIVLGATTGLIGSILFAFIVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALTKENTLLGSSPNGKYYKTVLENGLTIAVKRVTPFEGNSQESRRKSVKRGIQLELELLASLRHRNLMSLRAYVRENDGFSLVYDYVSTGSLADVMNRVRENELMLGWEVRLRIAVGVVKGLQYLHFTCVPQILHFNLKLTNVMLDGEFEPRLADYGLAKLLPNLDRGVSVNSPPECFHNCSRYTEKSDIFSFGTILGVLLTGKDPTDPFFGEPSRGGSLGSWLRHLKQAGEEREAIDKSILGEQGEEDEMLMAVGIAAACLSDMPADRPSSDELVHMLTQLNSF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00342 387 ProSiteProfiles Protein kinase domain profile. 105 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00342 387 PANTHER - 6 387 - -
Car03g00342 387 Gene3D Phosphorylase Kinase; domain 1 92 188 - -
Car03g00342 387 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 6 387 - -
Car03g00342 387 Pfam Protein kinase domain 108 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00342 387 Gene3D Transferase(Phosphotransferase) domain 1 189 386 - -
Car03g00342 387 SUPERFAMILY Protein kinase-like (PK-like) 109 382 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00342 Car-Chr3 8256429 8258708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00342 51 384 Receptor kinase-like Gene Family AT2G31880 34.085 1.18e-57 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Car03g00342 Pkinase 3.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00342 - - gmx:102664273 637.106