Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00339 ATGTTGGCTAGTATGGATGAAAAAGCTGATAAACCTAAAAAAGCATCTTCTACGAGTAAGCCGAAACCAAAACCTGCTCCGAAAGCTTCCACTTACACGGATGGTATTGATCTTCCTCCATCTGATGATGAAGAGGACGAATTGGATGAGCTAGAGCAAAAGCATAGGCCTGATGTGAAGCCGCTTGAGGTGTCTATTGCGGACAAGGAGTTGAAAAAGCGTGAAAAGAAAGATATTTTAGCTGCCCATGTAGCTGAACAGACTAAGAAAGAAGCTCTTAAGGATGATCATGATGCTTTCACTGTTGTTATTGGAAGCCGGACTTCGGTTCTTGATGGAGACGATGATGCTGATGCGAATGTTAAAGATATTACGATAGAAAATTTTTCGGTGTCTGCTCGGGGTAAAGAACTTTTGAAGAATGCATCAGTGAGGATATCACATGGCAAAAGGTATGGTTTGGTTGGGCCAAATGGAATGGGAAAGTCAACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCGGTACCAAAGAATATTGATGTTCTTTTGGTTGAGCAGGAGGTTGTTGGTGATGATAAAACAGCGCTTGAAGCCGTTGTTTCAGCTAATCTTGAACTTGTTAAAGTTCGACAAGAAGTTGCTGCTCTACAGAATGTAGCTACTGATGAAGGTGTAGATGACAATAATAATAATGAGGAAGAGGATGCAGGAGAAAAGCTAGCGGAGCTGTACGAACAATTACAGTTGATGGGGTCTGATGCTGCTGAAGCTCAAGCATCAAAGATTTTAGCTGGTCTCGGTTTTACAAAGGATATGCAGGGACGTCCTACAAAATCCTTTAGTGGTGGGTGGAGGATGAGAATTTCTTTAGCTCGGGCACTTTTTGTGCAGCCCACTTTATTATTGCTCGATGAACCCACCAATCATCTTGACCTGAGGGCTGTTCTCTGGTTAGAAGAGTACTTGTGCCGTTGGAAGAAAACTTTGGTGGTTGTATCACACGATAGAGATTTTCTCAATACAGTATGCACTGAGATTATCCACCTGCATGATTTGAAACTTCATTTTTACCGGGGAAATTTTGATGCTTTTGAGAGTGGGTATGAACAGCGTCGCAGAGAGGTGAATAAGAAGTATGAGATTTATGACAAGCAATTGAAAGCAGCTAGAAGGAGTGGAAACCGGGCTCAACAAGAAAAGGTGAAGGATCGAGCTAAGTTTGCAGCAGCTAAGGAAGCATCGAAAAGCAAAAGTAAGGGAAAGGTTGATGAGGATGAGACCCAAGTAGAGGTACCACACAAGTGGAGGGACTACAGCGTGGAATTCCACTTTCCTGAACCTACTGAGCTCACACCTCCACTTCTGCAGCTTATTGAAGTGAGTTTTAGCTACCCTAACCGGGAGGATTTCAGACTCTCAGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATTGTTGGGCCTAATGGAGCTGGAAAATCTACATTGCTAAATCTTCTTGCTGGCGATTTGGTTCCAAGTGAAGGTGAAGTTCGACGGAGTCAGAAGTTGAGGATAGGGAGATATTCCCAACACTTTGTGGACCTACTAACAATGGACGAAACACCTGTTCAGTACCTTCTTCGTCTCCACCCAGACCAGGAGGGACTTAGTAAACAGGAAGCTGTCCGTGCAAAACTTGGTAAATTTGGGCTACCTAGTCATAACCATCTTACCCCCATTGTCAAACTATCCGGAGGGCAGAAAGCTCGGGTGGTTTTCACTTCGATATCCATGTCAAAACCCCACATTTTATTGTTAGATGAACCCACAAATCATCTTGATATGCAAAGTATTGATGCATTGGCTGATGCCCTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCAAGATTGATATCACGTGTCTGTGATGATGAAGAAAGGAGTCAAATATGGGTTGTTGAGGATGGCACAGTCCGAACTTTCCCTGGAACGTTTGAGGATTACAAGGATGATTTGCTGAAAGAGATTAAAGCTGAAAGGACTTATCCACCCGCAGATGCCGGATTTTGCCTCTCTGCTCTTCATCTTCAATTCAACTCTAGAACTGAGTGTAATTATGCTGCGGGAAATGCTACCAATGCTTTTTTAATATATTGCAGCTGTTGGAAAGGTTGTTTGCACTGTCACAAAACATACATCGAGAATTGGTATAGTGATTGGAAATCCATACCTTAA 2238 0.429 MLASMDEKADKPKKASSTSKPKPKPAPKASTYTDGIDLPPSDDEEDELDELEQKHRPDVKPLEVSIADKELKKREKKDILAAHVAEQTKKEALKDDHDAFTVVIGSRTSVLDGDDDADANVKDITIENFSVSARGKELLKNASVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANLELVKVRQEVAALQNVATDEGVDDNNNNEEEDAGEKLAELYEQLQLMGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLHFYRGNFDAFESGYEQRRREVNKKYEIYDKQLKAARRSGNRAQQEKVKDRAKFAAAKEASKSKSKGKVDEDETQVEVPHKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVRTFPGTFEDYKDDLLKEIKAERTYPPADAGFCLSALHLQFNSRTECNYAAGNATNAFLIYCSCWKGCLHCHKTYIENWYSDWKSIP 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00339 745 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 456 681 IPR003439 GO:0005524
Car03g00339 745 Pfam ABC transporter 139 309 IPR003439 GO:0005524
Car03g00339 745 MobiDBLite consensus disorder prediction 390 429 - -
Car03g00339 745 SMART AAA_5 482 658 IPR003593 -
Car03g00339 745 SMART AAA_5 148 353 IPR003593 -
Car03g00339 745 PANTHER - 4 680 - -
Car03g00339 745 CDD ABCF_EF-3 124 354 - -
Car03g00339 745 ProSitePatterns ABC transporters family signature. 281 295 IPR017871 GO:0005524
Car03g00339 745 Coils Coil 373 393 - -
Car03g00339 745 Coils Coil 200 220 - -
Car03g00339 745 Gene3D - 418 684 IPR027417 -
Car03g00339 745 Pfam ABC transporter 473 608 IPR003439 GO:0005524
Car03g00339 745 MobiDBLite consensus disorder prediction 1 63 - -
Car03g00339 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 670 IPR027417 -
Car03g00339 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 382 IPR027417 -
Car03g00339 745 CDD ABCF_EF-3 456 658 - -
Car03g00339 745 MobiDBLite consensus disorder prediction 1 17 - -
Car03g00339 745 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 4 680 - -
Car03g00339 745 Gene3D - 121 408 IPR027417 -
Car03g00339 745 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 124 377 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00339 Car-Chr3 8193259 8196299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00339 455 659 Calmodulin-binding Proteins AT2G36910 28.571 3.05e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00339 K06184 - gmx:100806865 1117.45