Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00332 ATGGACGCGCGTCGAGCTCCACGCGCCGTCATTGACCCTAAAGTTCGCAAAGTCGGATTCTTCGCTCCACCGGATCCGATTCCGTTGAACATCTCTCCTTCCGTCAATTCTCTATCTCCTGTCATGATCCCTCCGCCGCGACATTCGTCGGAAAATCTCAACATCAATACTCGCTACTCCGTCACTTCCCCTTCCGGCGAGGAATCTATCGCTATCTCCAGCAGTTCGTCGGAGTTATTTCCCCCTCCGATTTCCCCTGCACCGTCATCCAGAATCGTTGCCGGAGATGGAGGAGGAATTGCAGCTTCCTCGTTTCCGCGCGGTGGATTTGACGTGACGGCGGTGAAGGCTAGTATCGGAGTTCCGGTGTGTAAATTGACTACGGTTTCTGTAGTCAATGCTGATTCCCTTGCAATTGACGAAAGAGAGAAAGCAGACAAAGGAGGAGGATCTGCAATGGAAGTGAAAGACCAAGCTATGAATTCAAAACAGAAGAAAGAGAAGTCCTCAAAAGCTGAAAGACGTGATCTTCAAGAAGCTCAACGAGCTGCAAAGGCTGCTGTAAAAGCTGAAGGAAACAAGCCATCTGGATCTGTGACTTCAGTGAATTTAAAATCAGCTAAAGCTGCAAAGCCCCCACAAAAAGTTGATAATACTTCTATTGCGGCTTCTGAGAAGAAGGGAGGTGATCGTCCATCAGAAAAGGATAGGAAAAAAGATGTTCCTCATCCACGCTTGCAATATGATGATAAGAGTAGAGTGGAGAAAGCTAAGCGTCGTGCTGTGGTAAACCAAACTGAAGCCAGGAACAGAGTGGAACTATTCAGACATTTGCCACAGTATGAACATGGGAGTCAGCTTCCTGATCTTGAGGCAAAGTTTTTCCAGATTGATCCTGTGCATCCTTCCGTTTATAAGGTTGGTTTGCAGTACCTGTCTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTTCAGGATGCCATCAAAGACTACGCAGTTCCACCTGAGAAGACCCTTGTGAGAGACTTGACAGCAAAAATAAGTAGCTATGTTTCATTCCTTATCGAGTGTCGACCTCTTTCAATCAGTATGGGAAATGCAATTAGATTTCTCAAAAGTCGAATCACAAAGCTACCTCCGACACTGTCTGAGTCAGAATCAAAAACTTCTCTTCAATCTGATATTGAACATTTTATAAATGAGAAGATTATACTTGCCAACAAGGTGATAGTAAATCATGCTGTCACAAAAATAAGAGATGGTGATGTTCTTCTTACATACGGGTCATCGTCAGCAGTTGAAATGATACTGTTACATGCACATGAGTTAGGGAAACAGTTTCGAGTTGTAGTAGTAGACTCTCGTCCAAGGCTTCAAGGGAAAGTTTTGCTTCGAAGACTAGTGGAGAAAGGTCTTAGTTGTACATACACTCATGTAAATGCTGTTTCCTACATAATGCATGAAGTTACCCGAGTTTTTCTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTTTATTCAGGAGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGTGTACCATGTCCCTGTTATAGTTTGTTGCGAGGCTTATAAATTTCATGAAAGGGTCCAGCTTGATTCAATATGCTCCAATGAACTTGGTGATCCAGATGTCATTTCAAAGGTTCCTGGTAGAGAGGATGTTAACCTCTTAGATGCTTGGGCCAATACTGAAAATCTGCAACTTCTAAATCTGATGTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTTACAGATTATGGCATGATCCCTCCCACAAGTGTTCCTGTAGTTGTAAGGGAATATAGCAGAGAACAGGTGTGGATGTAA 1878 0.4372 MDARRAPRAVIDPKVRKVGFFAPPDPIPLNISPSVNSLSPVMIPPPRHSSENLNINTRYSVTSPSGEESIAISSSSSELFPPPISPAPSSRIVAGDGGGIAASSFPRGGFDVTAVKASIGVPVCKLTTVSVVNADSLAIDEREKADKGGGSAMEVKDQAMNSKQKKEKSSKAERRDLQEAQRAAKAAVKAEGNKPSGSVTSVNLKSAKAAKPPQKVDNTSIAASEKKGGDRPSEKDRKKDVPHPRLQYDDKSRVEKAKRRAVVNQTEARNRVELFRHLPQYEHGSQLPDLEAKFFQIDPVHPSVYKVGLQYLSGDISGGNARCIAMLQAFQDAIKDYAVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRITKLPPTLSESESKTSLQSDIEHFINEKIILANKVIVNHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPRLQGKVLLRRLVEKGLSCTYTHVNAVSYIMHEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHVYHVPVIVCCEAYKFHERVQLDSICSNELGDPDVISKVPGREDVNLLDAWANTENLQLLNLMYDATPSDYVSMIVTDYGMIPPTSVPVVVREYSREQVWM 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00332 625 MobiDBLite consensus disorder prediction 227 260 - -
Car03g00332 625 MobiDBLite consensus disorder prediction 159 182 - -
Car03g00332 625 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 3 625 - -
Car03g00332 625 SUPERFAMILY NagB/RpiA/CoA transferase-like 273 618 IPR037171 -
Car03g00332 625 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 3 625 - -
Car03g00332 625 Coils Coil 163 183 - -
Car03g00332 625 MobiDBLite consensus disorder prediction 143 260 - -
Car03g00332 625 Pfam Initiation factor 2 subunit family 316 608 IPR000649 GO:0044237
Car03g00332 625 Gene3D - 412 618 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00332 Car-Chr3 7915399 7921464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00332 1 625 Eukaryotic Initiation Factors Gene Family AT5G38640 64.526 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00332 K03680 - gmx:100785938 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00332 03 7915399 7921464 Car03g00332 03 7915399 7921464 ECH
Car02g00345 02 3710903 3716381 Car03g00332 03 7915399 7921464 ECH