Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00315 ATGTTGAAAATGGTGAAACCAAGAGGAGTAGTTCTTCTTTGTTTTGCATTGTTCTTGTTTTTGAGCTCTTCAAATGCTTTACTTTCTCCTAAAGGTGTAAACTTTGAAGTTCAAGCTTTAATGGGTATAAAAGACTTTTTAATGGATCCGCATGGTGTTCTTGATAATTGGGATGGGGATGCAGTTGATCCATGTAGTTGGACTATGGTCACATGTTCTAATGAAAATCTTGTCATTGGCTTGGGCACCCCTAGTCAAAGTTTGTCAGGTACTTTATCTCCAAGCATAGGCAATTTAACCAACCTTCAGATTGTACTTTTACAGAATAACAACATAACTGGATCAATCCCTTCAGAATTAGGAAAACTTCCTAAGCTTCAAACTCTTGATCTCTCAAATAACTTCTTCAGTGGTGAAATTCCTCCTTCTCTTGGTCACCTAAGAAGTCTCCAATACTTGAGGCTGAATAATAATAGTCTTGTTGGTGAATGTCCAGAATCACTAGCTAACATGACACAACTTGCTTTTCTTGATTTGTCCTACAATAATCTTAGTGGACCAGTACCAAGAATTTTGGCCAAATCATTCAGCATTGTTGGTAACCCTCTTGTTTGTGCTACTGGAAATGAACCAAATTGTCATGGAATGACACTAATGCCAATATCCATGAACTTAAACAACAGTGAAGATGCTTTACCATCAGTCCGGCCGAAAACTCATAAAATGGCGATGGCTTTTGGGTTGAGTCTTGGATGTCTCTGCTTGATAGTTATTGGTTTTGGAGTTGTTCTTTGGTGGAGACACAAGCATAATCAACAACCATTTTTTGATGTCAAAGACCGGCATCATGAAGAAGTTTACCTTGGAAACTTGAAGAGGTTTCCATTTAGAGAACTTCAGATTGCAACTCACAACTTCAGCAACAAAAACATACTTGGAAAAGGTGGTTTTGGAAATGTGTACAAAGGAGTTCTATCAGATGGTACTATTGTAGCTGTAAAGAGGCTTAAAGATGGCAATGCAGCTGGAGGAGAGATTCAATTTCAGACTGAAGTTGAAATGATTAGCCTTGCAGTGCATAGAAACCTTCTTAGACTTTATGGATTTTGCATGACACCAACTGAAAGGCTTTTGGTTTATCCTTACATGTGCAATGGGAGTGTTGCTTCTCGATTGAAGGGTAAACCAGTCTTGGATTGGGGCACAAGAAAGAACATTGCATTAGGAGCAGCAAGAGGACTATTATACCTTCATGAGCAATGTGATCCAAAGATAATTCATAGGGATGTAAAAGCTGCAAACATATTGCTAGATAACTATTATGAAGCTGTAGTTGGAGATTTTGGTTTGGCAAAGCTTTTGGATCACCAAGATTCTCATGTCACAACTGCAGTGAGAGGAACTGTAGGGCATATTGCCCCAGAATATCTATCCACAGGACAATCTTCTGAGAAGACTGATGTGTTTGGATTTGGCATTCTGCTTCTTGAATTAATTACAGGACAGAGAGCCTTAGAGTTTGGAAAAGCTGCTAACCAAAAAGGAGCCATGCTTGATTGGGTGAAGAAAATTCATCAAGAGAAGAAGCTAGAATTGCTAGTAGACAAAGATCTAAAAAGCAACTATGACAAAAATGAGCTTGAAGAAATGGTTCAAGTAGCTCTCTTGTGTACACAATACCTTCCAAGCAATAGACCTAAAATGTCTGAAGTTGTAAGGATGCTTGAAGGTGATGGACTAGCTGAGAGATGGGAAGCTTATCAAAAAACAACTGATAATTCCAATGCCAAATACAAACCTCATGAATCATCTTTGTCAGATAGATATTCTGATCTTACTGATGATTCTTTGTTATTAGTTCAAGCCATGGAGCTCTCAGGACCAAGATGA 1890 0.3841 MLKMVKPRGVVLLCFALFLFLSSSNALLSPKGVNFEVQALMGIKDFLMDPHGVLDNWDGDAVDPCSWTMVTCSNENLVIGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNITGSIPSELGKLPKLQTLDLSNNFFSGEIPPSLGHLRSLQYLRLNNNSLVGECPESLANMTQLAFLDLSYNNLSGPVPRILAKSFSIVGNPLVCATGNEPNCHGMTLMPISMNLNNSEDALPSVRPKTHKMAMAFGLSLGCLCLIVIGFGVVLWWRHKHNQQPFFDVKDRHHEEVYLGNLKRFPFRELQIATHNFSNKNILGKGGFGNVYKGVLSDGTIVAVKRLKDGNAAGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMCNGSVASRLKGKPVLDWGTRKNIALGAARGLLYLHEQCDPKIIHRDVKAANILLDNYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELLVDKDLKSNYDKNELEEMVQVALLCTQYLPSNRPKMSEVVRMLEGDGLAERWEAYQKTTDNSNAKYKPHESSLSDRYSDLTDDSLLLVQAMELSGPR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00315 629 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 11 629 - -
Car03g00315 629 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Car03g00315 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Car03g00315 629 Gene3D Transferase(Phosphotransferase) domain 1 383 595 - -
Car03g00315 629 SUPERFAMILY Protein kinase-like (PK-like) 283 576 IPR011009 -
Car03g00315 629 Pfam Protein kinase domain 307 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00315 629 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 629 - -
Car03g00315 629 SMART LRR_typ_2 171 194 IPR003591 -
Car03g00315 629 SMART LRR_typ_2 123 146 IPR003591 -
Car03g00315 629 SMART LRR_typ_2 147 170 IPR003591 -
Car03g00315 629 SMART LRR_typ_2 99 122 IPR003591 -
Car03g00315 629 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Car03g00315 629 SMART serkin_6 306 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00315 629 ProSiteProfiles Protein kinase domain profile. 306 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00315 629 Pfam Leucine Rich repeats (2 copies) 100 140 IPR025875 -
Car03g00315 629 SUPERFAMILY L domain-like 36 206 - -
Car03g00315 629 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Car03g00315 629 Gene3D Phosphorylase Kinase; domain 1 275 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00315 Car-Chr3 7468854 7474874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00315 12 629 Receptor kinase-like Gene Family AT5G16000 77.885 0.0 982
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Car03g00315 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00315 - - gmx:100798412 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00315 03 7468854 7474874 Car03g00315 03 7468854 7474874 ECH
Car02g00298 02 3142930 3147319 Car03g00315 03 7468854 7474874 PCT