Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00314 ATGTTGGAGCAAGAACTCTTTaccaccaccaccacctcagccaccgccaccgcaaccaTTAGGCCTGCGGTCACGTGGCCACGAACATGTGACACGTGCCGCTCGGCCGCATGCGCGGTCTTTTGCCGCGCAGACTTGGCTTACTTATGTGCCGCGTGTGACGCGCGCGTCCACGCGGCCAATCGTGTAGCCTCGAGGCACGAGCGTGTTTGGGTCTGCGAGGCCTGCGAACGTGCCCCGGCGGCTTTTCTTTGTAAAGCCGATGCCGCATCTCTTTGCTCTACCTGTGATGCGGATATCCACTCTGCCAATCCTCTTGCCAGCCGCCACCAACGTGTCCCTATTCTTACGATCTCCGGCTACCTTTATGGTCCTCCGGCGACCCTTTTAGGTGCCGAAGATCACGAAGGGTTTGTTGGTGGTGGTGGTGACGTGgaggaagaggaggatgaagttgttgataatatggaagatgaagatgaagCAGCTTCATGGCTTTTGTTGAATCCTCTCaagaatagtaacaacaataataatagtaatgatcataatCAAGAGGGTAATAATGGATTTTTGTTTAATGGTGAAGTTGATGAGTATTTGGATCTTGTTGATTGTAACTCTTGTGGTGGTGGTGGTGATAACAATTTCAATACCAATACTACTCATCATGATGAGTATAGTGTTGTTCCTGTTCAACAGCAGCAAGTACAGAATTTTCAACTTGGGTTGGATCAATTTGAGTCTTCCAAACCTGGATTCAGTTACAATGGTTCTATTAGTCAAAGTGTATCAGTTTCATCAATGGATGTAGGTGTTGTACCAGAATCAACAATGACCTATTCAAGACCTCCAAAAGGAACAATTGACCTATTTTCTGGTCCTCCAATTCAAATGACTTCACATTTCTCTCCAATGGACAGAGAAGCAAGAGTCCTAAGGTACAGAGAAAAAAAGAAGACAAGAAAATTTGAGAAAACAATAAGGTATGCATCAAGGAAAGCCTATGCCGAGACTCGACCGCGTATAAAAGGTCGATTCGCAAAACGAACTGATGTAGAAGCTGAAGTTGATCAAATGTTTTCATCAACACTAATTACAGAAATTGGATATGGCATTGTTCCATCTTTCTGA 1134 0.4083 MLEQELFTTTTTSATATATIRPAVTWPRTCDTCRSAACAVFCRADLAYLCAACDARVHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSTCDADIHSANPLASRHQRVPILTISGYLYGPPATLLGAEDHEGFVGGGGDVEEEEDEVVDNMEDEDEAASWLLLNPLKNSNNNNNSNDHNQEGNNGFLFNGEVDEYLDLVDCNSCGGGGDNNFNTNTTHHDEYSVVPVQQQQVQNFQLGLDQFESSKPGFSYNGSISQSVSVSSMDVGVVPESTMTYSRPPKGTIDLFSGPPIQMTSHFSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSSTLITEIGYGIVPSF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00314 377 Pfam CCT motif 308 350 IPR010402 GO:0005515
Car03g00314 377 ProSiteProfiles Zinc finger B-box type profile. 68 115 IPR000315 GO:0008270
Car03g00314 377 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 25 377 IPR045281 GO:0009909
Car03g00314 377 SMART bboxneu5 25 72 IPR000315 GO:0008270
Car03g00314 377 SMART bboxneu5 73 115 IPR000315 GO:0008270
Car03g00314 377 Pfam B-box zinc finger 70 115 IPR000315 GO:0008270
Car03g00314 377 ProSiteProfiles CCT domain profile. 308 350 IPR010402 GO:0005515
Car03g00314 377 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 25 377 - -
Car03g00314 377 CDD Bbox1_BBX-like 30 72 - -
Car03g00314 377 ProSiteProfiles Zinc finger B-box type profile. 30 72 IPR000315 GO:0008270
Car03g00314 377 CDD Bbox1_BBX-like 72 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00314 Car-Chr3 7348613 7352025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00314 25 377 C2C2-CO-like Transcription Factor Family AT3G02380 56.568 4.27e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Car03g00314 zf-B_box 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00314 - - zju:107405905 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00314 03 7348613 7352025 Car03g00314 03 7348613 7352025 ECH