Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00303 ATGCAAGCCAAAGAAACTACATCACTCAATTATTTACACCCAAGTTCAGACCCATCTCCTTATCCATATCAAAACAACATAATCCAAAACACAATTCCAACATCTCAACTCTTAAAATTCTCCAACAATTTCCATTCTTTCCAAAACTTTCCACAAACTCTTCATCAAGATTTCAGTCCTCAATCCTCATGCATAAGCAACAACTCAACTTCAGATGAAGCAGATGAACAACAAGGACTAATCAACGAGAGAAAACATCGAAGAATGATATCGAACCGCGAGTCAGCTCGCCGGTCGCGAATGAGGAAACAAAAACACCTTGATGAACTTTGGTCACAAGTTGTTTGGCTAAGGAATGAAAATCATCAATTACTTGATAAGCTGAACAGTTTCTTTGAATCACATGATAGAGTTGTTCAAGAGAATGTTCAATTGAAAGAAGAAGCTTCGGAACTTCGACAAATGGTTTGTGACATAAAGTTGAATAGTTCTTGTCTTCCTTTGAGTCCTCTTGAAGATGTTCCTAGCATCACTTCACCATTTGTTAAATCTGACGATTCTTCAAATTAA 570 0.3684 MQAKETTSLNYLHPSSDPSPYPYQNNIIQNTIPTSQLLKFSNNFHSFQNFPQTLHQDFSPQSSCISNNSTSDEADEQQGLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLLDKLNSFFESHDRVVQENVQLKEEASELRQMVCDIKLNSSCLPLSPLEDVPSITSPFVKSDDSSN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00303 189 Pfam bZIP transcription factor 84 131 IPR004827 GO:0003700|GO:0006355
Car03g00303 189 SUPERFAMILY Leucine zipper domain 84 133 IPR046347 GO:0003700|GO:0006355
Car03g00303 189 MobiDBLite consensus disorder prediction 1 20 - -
Car03g00303 189 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Car03g00303 189 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Car03g00303 189 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Car03g00303 189 MobiDBLite consensus disorder prediction 58 76 - -
Car03g00303 189 CDD bZIP_plant_GBF1 85 130 IPR045314 GO:0003700|GO:0006355
Car03g00303 189 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 188 IPR044521 -
Car03g00303 189 MobiDBLite consensus disorder prediction 58 78 - -
Car03g00303 189 Coils Coil 135 155 - -
Car03g00303 189 Gene3D - 82 137 - -
Car03g00303 189 PANTHER BZIP TRANSCRIPTION FACTOR 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00303 Car-Chr3 6983496 6984327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00303 10 166 bZIP Transcription Factor Family AT3G30530 58.896 2.83e-50 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g00303 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00303 - - aprc:113863596 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00303 03 6983496 6984327 Car03g00303 03 6983496 6984327 ECH
Car02g00293 02 3115638 3116441 Car03g00303 03 6983496 6984327 PCT