Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00298 ATGACAATTGGTAATCTTGCACCTAAGACAGACAAGAAGAAATCATCAAGGAAGAACAAATCAGTTGTTGTTAGTGAGAATGCACCTTTATTGCCTAAAAGTCATGAAAGTGATTCTGGTTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTAGCAACAACAATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACTTTGAAACAGTTGGGTTTGGTTCCTGGTCTTGTTGCTATTGTTTTGATGGCTTTTTTGACTGAAAAGTCAATTGAGCTTTTGATAAGGTTTACAAGGGCAGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTTTTGCACAGATTTGTGTTATTGTTAATAACATTGGTGTGCTCATTGTTTACATGATTATAATTGGTGACGTGCTTTCTGGAACATCTTCAAGCGGAGAACATCACTATGGTATACTTGAAGGATGGTTTGGTGTGCACTGGTGGACCGGGAGGACATTCGTCGTCCTTCTTACAACAGTTGCTATATTTGCGCCCTTGGCAAGCTTTAAACGAATTGATTCGTTGAGATTCACATCGGCCCTTTCCGTTGCACTGGCAGTTGTTTTTCTCGTCATTGCTGTGGGAATTTCTGTTGTCAAGATTATTAGCGGAGGCATTAGCATGCCAAGACTCTTCCCAGTTGTTACTGATGCAACATCAATCTTTAACCTATTCACTGTGGTTCCTGTGTTTGTGACTGCATATATCTGCCATTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCGTCACAGATGCAAGGTGTTGTGCGTACCGCCCTTGGTCTATGCTCATCCGTGTACCTAATGATAAGCTTCTTCGGGTTCCTTCTATTTGGTGAAGATACTCTTGATGACGTGCTTGCCAATTTCGATACCAATCTCGGAATCCCTTTCGGTTCTTTGCTCAATGATGCCGTTCGTATTAGCTATGCTGCACACCTCATGCTTGTATTTCCAGTTGTCTTTTATCCATTGCGACTCAACATCGACGGTCTTCTCTTCCCTAAATCAAAGCCTTTGGTTTTGGATAACTTCAGATTTACATCAATCACTATTTCCCTTATTGGTGTTATCTTCTTGGGAGCAAATTTCATTCCTAGCATTTGGGATGCTTTCCAGTTCACCGGAGCAACTGCCGCAGTATGTATAGGATTCATCCTTCCAGCTGCCATCACTCTTAGGGATCGCTACAACATCGCTACTAAATCAGACAAAGTTCTATGTGTCATCATGATAGTCCTCGCAGTCTTCTCAAACATTGTGGCTATATACAGTGACGCCTATGCCTTGATTAAGGTGAACAAAACTTCGCGCGAATGA 1398 0.4142 MTIGNLAPKTDKKKSSRKNKSVVVSENAPLLPKSHESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLVPGLVAIVLMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKAFAQICVIVNNIGVLIVYMIIIGDVLSGTSSSGEHHYGILEGWFGVHWWTGRTFVVLLTTVAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGISVVKIISGGISMPRLFPVVTDATSIFNLFTVVPVFVTAYICHYNVHSIDNELEDSSQMQGVVRTALGLCSSVYLMISFFGFLLFGEDTLDDVLANFDTNLGIPFGSLLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFPKSKPLVLDNFRFTSITISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFILPAAITLRDRYNIATKSDKVLCVIMIVLAVFSNIVAIYSDAYALIKVNKTSRE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00298 465 MobiDBLite consensus disorder prediction 1 24 - -
Car03g00298 465 Pfam Transmembrane amino acid transporter protein 47 450 IPR013057 -
Car03g00298 465 PANTHER AMINO ACID TRANSPORTER 11 463 - -
Car03g00298 465 PANTHER AMINO ACID TRANSPORTER AVT6A 11 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00298 Car-Chr3 6888332 6893283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00298 3 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.683 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00298 K14207 - gmx:100796345 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00298 03 6888332 6893283 Car03g00298 03 6888332 6893283 ECH
Car02g00290 02 3069890 3074999 Car03g00298 03 6888332 6893283 PCT