Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00284 ATGGCTAGGTCTGCCAAAGGCAATCGAGACGAAGACTTGGTGGATGATGATGACGAACAAGACCTCTTTACATCAAACACTTCTTCCTCTCTCAACATCAACAACAACAATGCAGTGAAGGGGGATGAACCTAGCAGGGGGAAAAGGGCTAACACTCATCGTTCCAAGCATTCAGAAACTGAGCAGCGTAGAAGAAGCAAAATTAACGAAAGATTTCAGGTTCTGAGAGATCTCATACCTCAAAATGATCAAAAAAGAGATAAAGCTTCCTTCTTGTTGGAGGTTATTGAGTATATTCAGTTCCTACAGGAAAAATTACAAATATATGAACAATCTTATGAAGGATGGAATCAGGAGCCGACGAAATTAACTCCATGGAGAAATCATCACGGGCCTGCAGATAATACTACAGATCCTTCTCGAGCAATTCAAAATGGGTCTGTTCGTGAAAAAAATAACAATGTCTCTCCATCACTGCCAAAAAACATACAGAACTCAATAGATTCTGACCTCTCAACAACTATTGAGAAGGGCCACACTCTTGGTTTGGCCGGAGAAGCAGTTCCCATGACCATGCAAATGCGATTGGACATGTTTGATCCGGTTGTTAGCAGCGGTATAGTGAGCCAACAGATGCCGGAGTTGCCTTTATCTAATGCGGACAAGGACGACTATATTGTTGCAGATAATACATTGAAAGAACAAGAGGAGCTGACAAGTGAAAGTGGATCAGATAGCATCTCAAATGCCTATTCTCAAAGAATATTGGGTACTCTCACACAAACCCTGCAGTCTTCAGGTGTGGATTTGTCCCAGGCCAGTGTCTCGGTGCAAGTCGATGTTGGTAGACGAACAGATACTAGGTTAACCTCCTCCCCATATGGCTCAAAGGGTCATGAAAATCCATTTGCGAGCGATCGAGCAATGGCATGTTCAGGAATTGATTACTTCAGTGAGGATTCTGAACTAAGTCCAAAGAGATTCAGACGAGAAGCAAGCTAG 1002 0.4291 MARSAKGNRDEDLVDDDDEQDLFTSNTSSSLNINNNNAVKGDEPSRGKRANTHRSKHSETEQRRRSKINERFQVLRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQIYEQSYEGWNQEPTKLTPWRNHHGPADNTTDPSRAIQNGSVREKNNNVSPSLPKNIQNSIDSDLSTTIEKGHTLGLAGEAVPMTMQMRLDMFDPVVSSGIVSQQMPELPLSNADKDDYIVADNTLKEQEELTSESGSDSISNAYSQRILGTLTQTLQSSGVDLSQASVSVQVDVGRRTDTRLTSSPYGSKGHENPFASDRAMACSGIDYFSEDSELSPKRFRREAS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00284 333 MobiDBLite consensus disorder prediction 23 41 - -
Car03g00284 333 MobiDBLite consensus disorder prediction 284 304 - -
Car03g00284 333 Pfam Helix-loop-helix DNA-binding domain 54 103 IPR011598 GO:0046983
Car03g00284 333 MobiDBLite consensus disorder prediction 120 166 - -
Car03g00284 333 CDD bHLH_AtBIM_like 51 127 - -
Car03g00284 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 102 IPR011598 GO:0046983
Car03g00284 333 Coils Coil 99 119 - -
Car03g00284 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 131 IPR036638 GO:0046983
Car03g00284 333 MobiDBLite consensus disorder prediction 42 68 - -
Car03g00284 333 MobiDBLite consensus disorder prediction 284 298 - -
Car03g00284 333 MobiDBLite consensus disorder prediction 1 68 - -
Car03g00284 333 SMART finulus 58 108 IPR011598 GO:0046983
Car03g00284 333 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 332 IPR044295 GO:0003700|GO:0006351|GO:0046983
Car03g00284 333 PANTHER TRANSCRIPTION FACTOR BIM3 1 332 - -
Car03g00284 333 Gene3D - 49 124 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00284 Car-Chr3 6463815 6469846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00284 3 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 41.270 1.43e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car03g00284 HLH 1.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00284 - - mtr:MTR_7g017320 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00284 03 6463815 6469846 Car03g00284 03 6463815 6469846 ECH