Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00269 ATGGGTTCTCTTTGTTCTTGCTTGAGTGTTGACGATTTGGAAGATTATATGAATCCACATAGTCATTTATTTAGGAATTGTGTGTGTGTCAGTTGCTTCGTGCAAAACCTTTTGAGTGTCTATGCAACAATATTCCGTAGAGGAGAAGTGCATTCGCTTCCTTCATCTGTACAGGGGGCAGCATCTATGACTTCTACAGCATCACTTGATAATTCTCTATCTGACATGTACCGTTCTCCTCCAAGGCCATTGCCTTATGATGCAGACCCTAGGTATTTCCGCCCACAGCATGACAGGCTAGTTTCAAGACATGAGAAGGGTTCTAGTCATTTGAACGAGGAGTCGGAACCTCTAAGGAGTGATGTGGATATAGATCAAGAATCTTTGAATTCGAGTGGTAAATGGAATGAAAGCACTGGCAAAGATGAATCAAAGGAATACCGTTCCAAGTCATCGGTAAGACTTTCATCGGCAAAACTTACAACTGGAGCTGCACTTGTTTTGCTCACACTCTTAATATTAGTTGATGCCAAAGAATACACCGAAGAGAATCCAAAGATAGTGACAAAATGTTCTCATCATTTTCATCTTGGATGCATATACGAGTGGATGGAGAGAAGTGACAGCTGTCCTGTTTGTGGGAAGGTAATGGTATTCGATGAAACGACTTAA 672 0.4137 MGSLCSCLSVDDLEDYMNPHSHLFRNCVCVSCFVQNLLSVYATIFRRGEVHSLPSSVQGAASMTSTASLDNSLSDMYRSPPRPLPYDADPRYFRPQHDRLVSRHEKGSSHLNEESEPLRSDVDIDQESLNSSGKWNESTGKDESKEYRSKSSVRLSSAKLTTGAALVLLTLLILVDAKEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00269 223 MobiDBLite consensus disorder prediction 103 123 - -
Car03g00269 223 Pfam RING-H2 zinc finger domain 182 213 IPR024766 GO:0008270
Car03g00269 223 MobiDBLite consensus disorder prediction 103 153 - -
Car03g00269 223 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 222 - -
Car03g00269 223 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 222 - -
Car03g00269 223 MobiDBLite consensus disorder prediction 138 152 - -
Car03g00269 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 222 IPR013083 -
Car03g00269 223 SUPERFAMILY RING/U-box 179 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00269 Car-Chr3 6165018 6168737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00269 1 222 C3H Transcription Factor Family AT5G15790 52.814 1.78e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00269 - - gmx:100788192 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00269 03 6165018 6168737 Car03g00269 03 6165018 6168737 ECH