Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00256 ATGGAGAATCCACAAACATCCAAAGACAATGATGTCCTCAATGCCATGGTACTAGGTGCCAACTTGGTGTTTCCTGCAGTTCTTAATGCTGCAATGGAACTCAACTTGTTTAACATTATTGCCAAAGAAATTAGCTCACAAGATGATAACAATAAAGGTGGATTCATTTCAACTTTTGAAATTGCTTCAAAGTTATCAACACAACACTCTGAGTTGCCAAATAGGCTCGATCGTATGTTGTGCTTGCTTGCTAGCTATTCTCTTTTGTCTGTATCACCTCGAACCAATGATGATGATGGTAACATTGTTAGATTTTATGGAATCACATCTTTGGGAAAATACTTTGTTAagtggttgtttctcttcttcctccttcttcctcttttcattgttaacaGTTATGACAACAATGATGATTATTTGGGCTCAATGATATCATACATGTGTCACCCTACTCTCTTAGGAGTGTGGTTGAATCTCAAGGAAGCAATTATGGAGTCAGAGATTGATCTATTCAAAAAAGTCCATGGAATATCTATCTATGATTATTTTGAAAAAGATCCACAAATAAACGAAATATTTAATAAATCAATGACTGAAACATGTACAGCTCATATGAAAGGAATCCTTGAAATATACAAAGGATATGAAGGACTAACAACACTAGTTGATGTAGGAGGTGGAAATGGACAAAGCCTCAAAATGATTTTGTCTAAATATCCATCAATAATCAAGGCAATCAATTTTGATCTTCCTCAAGTGATTGAAAATGCACCACCCTTTTCAGGTATTGAACATGTTGGAGGAAATATGTTTGAATGTGTTCCACAAGGAGACGCCATAATGCTTAAGTTTGTGTGCCATAATTGGTCGGACGAAAAATGCTTAGAAATTTTAAGCAATTGTCACAAAGCTTTGCCTCCAAAAGGTAAAGTCATTCTTGTGGAGTTCATATCACCAGAAGATTCAGAATCAATAAATATATCTTATAAGCTGACTTCAACTATTGATAATATGATGTTTATCACTACTGGTAGAAGGGAAAGAACCCTAAAAGAATATGAAAATTTGAGTAAAAGCTCTGGATTTTCTAAACTTGGAAGTTGTTTGTCTTGTTTTCTCTATCCTTGGAGTGATGGAACTTTACAAATAAATAATTATATAATTTCAATAGTAGTTGGTCTTGCATGCCAATTTTATTAA 1203 0.3267 MENPQTSKDNDVLNAMVLGANLVFPAVLNAAMELNLFNIIAKEISSQDDNNKGGFISTFEIASKLSTQHSELPNRLDRMLCLLASYSLLSVSPRTNDDDGNIVRFYGITSLGKYFVKWLFLFFLLLPLFIVNSYDNNDDYLGSMISYMCHPTLLGVWLNLKEAIMESEIDLFKKVHGISIYDYFEKDPQINEIFNKSMTETCTAHMKGILEIYKGYEGLTTLVDVGGGNGQSLKMILSKYPSIIKAINFDLPQVIENAPPFSGIEHVGGNMFECVPQGDAIMLKFVCHNWSDEKCLEILSNCHKALPPKGKVILVEFISPEDSESINISYKLTSTIDNMMFITTGRRERTLKEYENLSKSSGFSKLGSCLSCFLYPWSDGTLQINNYIISIVVGLACQFY 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00256 400 PIRSF O-mtase 1 373 IPR016461 GO:0008168
Car03g00256 400 Gene3D Vaccinia Virus protein VP39 134 369 IPR029063 -
Car03g00256 400 Gene3D - 1 115 IPR036388 -
Car03g00256 400 CDD AdoMet_MTases 221 315 - -
Car03g00256 400 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 386 IPR016461 GO:0008168
Car03g00256 400 PANTHER O-METHYLTRANSFERASE 7 370 IPR016461 GO:0008168
Car03g00256 400 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 366 IPR029063 -
Car03g00256 400 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Car03g00256 400 SUPERFAMILY "Winged helix" DNA-binding domain 10 117 IPR036390 -
Car03g00256 400 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 7 370 - -
Car03g00256 400 Pfam Dimerisation domain 27 84 IPR012967 GO:0046983
Car03g00256 400 Pfam O-methyltransferase domain 157 364 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00256 Car-Chr3 6098856 6106174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00256 5 373 Monolignol Biosynthesis Gene Families AT5G54160 44.385 1.51e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00256 K13066 - gmx:100798295 413.305