Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00241 ATGAGGTTTCTCATATCAGCTCTATGTGTCATTGTGCTATTTTCTTATGCAGCTGCGTACGATCCTTTGGATCCTAACGGAAACATAACGATCAAATGGGATGTCGTCTCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAACTTCCAAATGTACCGGCACATAATGAATCCAGGATGGACATTAGGATGGTCATGGGCCAAGAAAGAAGTTATATGGTCAATGGTAGGATCTCAAACAACTGAACAAGGAGATTGTTCTAAGTTCAAAGGCAATGTTCCTCATTGCTGCAAGAAAACTCCAACAGTTGTTGACTTGCTACCTGGTGTACCTTACAATCAGCAATTCTCAAACTGTTGTAAAGGTGGTGTTGTAGCAGCATGGGGACAAGACCCTTCATCGGCTGTATCTTCTTTCCAAATTAGTGTTGGACAAGGTGGTACTTCAAATAAGACAGTGAAACTTCCTAAGAATTTTACTCTCTTGGCTCCTGGACCTGGATATACTTGTGGTCCTGCTAAGATTGTTCCTTCCACCACTTTCCTTACGGCGGATAAACGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCACAATTTCTTGCAAGAAAGAATCCAAGTTGCTGTGTATCTTTGTCATCCTTCTATAATGAGACAATTACCCCTTGTGCTTCTTGTGCTTGTGGCTGCCAGAACAAGAAGAATTGCGTCAAGGGTCATTCCAAATTCCTTGACATGGTGGGGTTTCATACTCCAAAGAAAGACAATGAACCATTACTACAGTGCACTCATCATATGTGCCCCATTAGGGTTCATTGGCATGTGAAAGTCAACTATAAGGACTATTGGAGAGTTAAGATTGCTGTGACAAATTTCAATTACAGATTGAATTATTCTCTATGGACTCTTGCTGTGCAGCATCCAAATCTTAACAATGTTACCCAAGTTTTCAGCTTTGATTACAAGCCTTTGCTTCCCTATCAATCCATAAATGACACTGGTATGTTCTATGGCATGAAATTCTTTAATGATCTCTTGATGGAAGCTGGACCAAGTGGAAATGTTCAATCAGAAGTGCTTCTTCAGAAGAACAAGGATACATTCACACTCAACCAAGGTTGGGCATTTCCTCGTAGAGTCTACTTCAATGGTGAAGAATGCATGATGCCCTCACCTGATACCTACCCTTTCCTCCCTAATTCTTCCCCTGTCAATGTTCTCAACTTCCCAACATCCATCCTCTCATTGTTGCTTGTCTTGCTAGTTGTTTGGTGA 1299 0.4172 MRFLISALCVIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSSFQISVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTTFLTADKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCASCACGCQNKKNCVKGHSKFLDMVGFHTPKKDNEPLLQCTHHMCPIRVHWHVKVNYKDYWRVKIAVTNFNYRLNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYQSINDTGMFYGMKFFNDLLMEAGPSGNVQSEVLLQKNKDTFTLNQGWAFPRRVYFNGEECMMPSPDTYPFLPNSSPVNVLNFPTSILSLLLVLLVVW 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00241 432 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Car03g00241 432 PANTHER PROTEIN COBRA 7 429 IPR006918 GO:0010215|GO:0031225
Car03g00241 432 PIRSF COBRA 1 432 IPR006918 GO:0010215|GO:0031225
Car03g00241 432 PANTHER COBRA-LIKE PROTEIN 7 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00241 Car-Chr3 5727868 5731384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00241 1 430 COBRA Gene Family AT3G29810 64.920 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00241 - - gmx:100783410 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00241 03 5727868 5731384 Car03g00241 03 5727868 5731384 ECH
Car02g00272 02 2760961 2763926 Car03g00241 03 5727868 5731384 ECH
Car03g00241 03 5727868 5731384 Car02g00272 02 2760961 2763926 PCT