Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00239 ATGGCCCAATCCTTCGGTCAGACTGAGATTAATTGGGACAAGCTAGATAAAACTAAGTTCTATGTCGTTGGAGCTGGACTCTTCACTGGTGTTACAGTTGCACTTTACCCGGTTTCAGTTGTGAAAACTAGGCTTCAAGTTGCAACAAAGGATGCTGTAGAGAGAAGTGCCTATTCTGTTGCTAAAGGATTACTTAAAACAGATGGCATCCCTGGTTTGTATCGAGGGTTTGGCACGGTTATTGCCGGTGCAATACCGGCCAGAATCATATTCCTCTCTGCTCTAGAGATTACAAAGGTGTCTACCTTTAACATGCTGCAACCATTCGGACTATCAGAAACTACTCAGGCTGCCTTGGCAAATGGAGTTGCAGGCATGACATCGTCACTTGTCGCTCAATCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAAATGATGGTGCAAGGATACTCAGGCCATGCCCGATATAGCGGGGGTATGGATGTGGCTCGTAAGATTTTAAGGTCTGATGGCATTCGAGGATTGTATCGAGGATTCGGTCTTTCTGCTCTTACTTATTCGCCTTCTAGCGCGGTATGGTGGGCAAGTTACGGTTCAAGTCAACGGTTCATTTGGAGATTCTTAGACCAAGGTGGAAATGATGGAGACACTCCTAGTGTGCAGAAGATTGTGTTAGTTCAAGCTGCGGGAGGGATAATTGCCGGTGCATCTGCTTCCTGCATTACAACCCCATTGGACACTATCAAGACACGGTTACAGGTGATGGGACATGATAGTAGAAGCTCTATAAAACAAGTTACTAAAGATTTAATCAGTGAAGATGGTTGGAAAGGACTCTATAGAGGGTTTGGTCCAAGATTTTTTAGCATGTCAGCATGGGGAACTTCAATGATATTGACTTATGAGTATCTGAAACGGTTATGCACCAAAGACGAATAG 942 0.4427 MAQSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKDAVERSAYSVAKGLLKTDGIPGLYRGFGTVIAGAIPARIIFLSALEITKVSTFNMLQPFGLSETTQAALANGVAGMTSSLVAQSVFVPIDVVSQKMMVQGYSGHARYSGGMDVARKILRSDGIRGLYRGFGLSALTYSPSSAVWWASYGSSQRFIWRFLDQGGNDGDTPSVQKIVLVQAAGGIIAGASASCITTPLDTIKTRLQVMGHDSRSSIKQVTKDLISEDGWKGLYRGFGPRFFSMSAWGTSMILTYEYLKRLCTKDE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00239 313 Pfam Mitochondrial carrier protein 25 100 IPR018108 -
Car03g00239 313 Pfam Mitochondrial carrier protein 118 205 IPR018108 -
Car03g00239 313 Pfam Mitochondrial carrier protein 226 312 IPR018108 -
Car03g00239 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Car03g00239 313 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 313 - -
Car03g00239 313 PRINTS Mitochondrial carrier protein signature 30 48 IPR002067 GO:0055085
Car03g00239 313 PRINTS Mitochondrial carrier protein signature 74 92 IPR002067 GO:0055085
Car03g00239 313 PRINTS Mitochondrial carrier protein signature 125 147 IPR002067 GO:0055085
Car03g00239 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Car03g00239 313 SUPERFAMILY Mitochondrial carrier 13 305 IPR023395 -
Car03g00239 313 Gene3D Mitochondrial carrier domain 21 313 IPR023395 -
Car03g00239 313 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 313 - -
Car03g00239 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 308 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00239 Car-Chr3 5684750 5692038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00239 10 313 Chloroplast and Mitochondria Gene Families AT5G15640 75.244 3.96e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00239 K15121 - gmx:100782750 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00239 03 5684750 5692038 Car03g00239 03 5684750 5692038 ECH
Car02g00270 02 2739091 2742003 Car03g00239 03 5684750 5692038 PCT