Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00238 ATGAGAAATATATTTGATCAATGGAAGTCCAAGAAGGAAAGTGAATTCCATTGCCAGCTTCATCACCCAAATTTGACATCTTTAATAGGATTCTGTGACCAGAAAGATGAGAGGATTCTTGTGTATGAGTACATAGTCAATGGCTCTCTCTATGATCACTTATGTTCAAGGAATATGGAACTACTTTCATGGAAGAAAAGGCTTGAAATATGCATTGTAGCAGCAAAAGGACTACACTATCTTCATACTGGAGCAAAGTGCATGATTTTTCATTGTGACTTAACGCCTCAAACCATTCTTTTAGATAACAGTTTGGTACCAAAACTATCACTTCTTGGATATTCATTACAAGGGAAGCTTTTTAAATCGAAGCCAAAACCAATTAAAGTCGACATCCTTATCTCTAACTTTTTGGAGAAGTTTACAGCTGATGAGATTATTGATCCCATTCTCATGAGATTGATTGCACCACAATGTTTGGAAGTGTACATTGATGTCATGAAAAGATGCTTGAATATAGAACCAAATGAAAGACCAAAATGGGTGAGGTTGAACTTGAGCATGTTCTGGCACTGCAGGAGGAAACAGATGATGGAAAAAGTAATGCTGATTATAACACAAGGGCGCTAA 630 0.3667 MRNIFDQWKSKKESEFHCQLHHPNLTSLIGFCDQKDERILVYEYIVNGSLYDHLCSRNMELLSWKKRLEICIVAAKGLHYLHTGAKCMIFHCDLTPQTILLDNSLVPKLSLLGYSLQGKLFKSKPKPIKVDILISNFLEKFTADEIIDPILMRLIAPQCLEVYIDVMKRCLNIEPNERPKWVRLNLSMFWHCRRKQMMEKVMLIITQGR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00238 209 PANTHER OS07G0166700 PROTEIN 4 132 IPR045272 GO:0004714|GO:0006468
Car03g00238 209 PANTHER OS07G0166700 PROTEIN 142 180 IPR045272 GO:0004714|GO:0006468
Car03g00238 209 Gene3D Transferase(Phosphotransferase) domain 1 6 199 - -
Car03g00238 209 SUPERFAMILY Protein kinase-like (PK-like) 11 184 IPR011009 -
Car03g00238 209 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00238 209 PANTHER TYROSINE KINASE FAMILY PROTEIN 142 180 - -
Car03g00238 209 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 132 - -
Car03g00238 209 Pfam Protein tyrosine and serine/threonine kinase 11 113 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00238 Car-Chr3 5680863 5682478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00238 14 115 Receptor kinase-like Gene Family AT2G21480 51.852 3.81e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car03g00238 PK_Tyr_Ser-Thr 6.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00238 - - cam:105851714 435.647