Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00230 ATGATTAAGAATTCAAAAGAAGCATTGAAGCAAGAGGGTCATTCAAACTCAAACAATGATGAAAAAGAAAAGGCTTCATCATCTAACTCCTTAGCATCACAATGGTCAAGATTGAAGGATCCAAGGATTGTTAGAGTATCAAGAGCCTTTGGTGGAAAAGATAGACATAGCAAAGTTTGCACAATAAGAGGATTAAGAGATAGAAGAGTAAGGCTTTCAGTTCCAACAGCTATTCAACTTTATGATCTTCAAGATAGGTTAGGGCTTAATCAACCTAGTAAAGTTGTTGATTGGTTGCTTAATGTAGCTAAGCATGAAATTGATGAACTTCCACCACTTCCAAATTTTCCATCTCATGGAAATTTCAACTTTGGTTTTCCATCTATTAATATTGAAGCCAACACCAACACCTCTCAACTTAATCAACAACTATTGAATATCAATAGGAATATTCCATGGGAAGGTTCAACTTCAAGCCAAAATTCTATGTGGAAATTGAAGCCTAAAGAAGTTACACAAGAAATGGTTATTGATAATAAAGCAAATTATTGGATGAATAGAATTGAAGAAGATGATGATAATAATAACAAGCATGGAAGCAATGAAGGTAATAATTCTAGTGACCATGTTTTGTCAAGTAATAATAACAATTTGTTATTACAAAGAACCAATCATCAAGCTTCATTTCTTGGCTTGTTAAATACTATGCCATCAATGGGTAATTACCAATGGGGAGGTAATTCCAATGTTGATGTTAATTCTCAATTGGGAAACCATATTGGTTTTACAAACCAAACAAATGTTAATGTTGTTACATCTTTGCCACCAATGTTGTCTTTATCAACTGGAAATTCTCAAATGATGCCATATTTCCCTTCTCATCATCATGTTAATGCAATGGAGATGGATAATCATCATCATCAAAGACAAATCAACCATCATAACTATCAAATGTTGAGTTCAAGTTCTCAAAATCCATTGAATAATTCTCTCAACAATCCATCCTTCAATTTGGCTATGATGATTCCTAAAGAAAATCCATCCAATAAAGATCAAGATTTCACTCCTAAGTGA 1074 0.3305 MIKNSKEALKQEGHSNSNNDEKEKASSSNSLASQWSRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNVAKHEIDELPPLPNFPSHGNFNFGFPSINIEANTNTSQLNQQLLNINRNIPWEGSTSSQNSMWKLKPKEVTQEMVIDNKANYWMNRIEEDDDNNNKHGSNEGNNSSDHVLSSNNNNLLLQRTNHQASFLGLLNTMPSMGNYQWGGNSNVDVNSQLGNHIGFTNQTNVNVVTSLPPMLSLSTGNSQMMPYFPSHHHVNAMEMDNHHHQRQINHHNYQMLSSSSQNPLNNSLNNPSFNLAMMIPKENPSNKDQDFTPK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00230 357 MobiDBLite consensus disorder prediction 190 213 - -
Car03g00230 357 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Car03g00230 357 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 339 IPR005333 GO:0003700
Car03g00230 357 MobiDBLite consensus disorder prediction 1 21 - -
Car03g00230 357 Pfam TCP family transcription factor 52 189 IPR017887 -
Car03g00230 357 MobiDBLite consensus disorder prediction 199 213 - -
Car03g00230 357 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 339 - -
Car03g00230 357 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00230 Car-Chr3 5307192 5309295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00230 22 117 TCP Transcription Factor Family AT3G02150 77.083 5.19e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car03g00230 TCP 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00230 - - gmx:100816424 329.331