Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00229 ATGAGCCAAGCGCCAACAACAAAGATATTGTGGACTAGTGGTGGCATTATCTTTCAACTTCATGGTTGCAGTTGGAATCATCATGGCAAACAAATTGCACTCTCAGTGTTTCCTGTGTCTCCCTCATCTAAAACAACTCCATTCTTTTCTATATTTGCACTTGGTGCTGTTATGGATTTTGCTTTTGGCCTTGCAAACACCAGCCTCAAGCATAACAGTGTTGGTTTCTATCAAATGTCTAAGATTGTTGTTACCCCAACAATTGTTTTGGCAGAGTTTATACTTTATAGAAAAACCATTCCTTCAAAAAAGATTTTGGCTTTGGCTGTTGTATCAGCTGGTGTAGCAGTTCCTACTGTGTCAGCTTTAGAGTTCAATTTATTTGGTGCTATAGTTGCCATTATATGGATAGTACCAAGTCCCATAAATAAAATTTTATGGTCTACTTTGCAGCAGCAAGGAAATTGGACAGCTTTGGCCATGACAGGTGAGAGCGATCATGTAGAAATCGAGTCTGTAAGAGCGCCTTTTTTGTTGTCCGGGGCGAAAGTTGTGGATGGATATGCTCAAATGCTTGTAACTTATGATGGAGGCAACACATCTTGGGGTCAAATGACGAATTCAATAGCCCAAGACAGTAACGAAAGAACGCCTTTACAAGCTCGGCTTAACAAGTTAACCTCTTCGATTGGAAAGGTTGGACTTGCAGTAGCATTTCTTGTTCTTCTAGTGTTGCGTATTCGTTATTTCATGGGTAACACAGAAGATGAGAAAAGGAATAAGGAGTTTCAAGGAACAAAAACTGATATTAACGACGTTTTAAATGCTATTGTAAGAATTGTTGCAGCTGTTGTTACTATTGTTGTTGTGGCTATCCCTGAGGGTCTGCCGTTAGCTGTGACACTCACATTAGCTTACTCCATGAAAAGAATGATAACTAGTAGTGTGTATAAGCCTTCATCAGGATTTGTACCTGAGATTTCAGGTAGCCCAACAGAGAAAGCTATACTCTTGTGGGCGGTATCGGATTTAGGTATGGACATGGATGAAATGAAACAGAAACATAAAGTCCTTCATGTTGAAACATTTAACTCGGAGAAGAAACGGAGTGGTGTTGCGATAAGGAAGGAAAATGAGAACAAAGTCGATGTGCATTGGAAAGGAGCTGCAGAGTTGATACTTGCAATGTGTGATAACTAG 1200 0.4 MSQAPTTKILWTSGGIIFQLHGCSWNHHGKQIALSVFPVSPSSKTTPFFSIFALGAVMDFAFGLANTSLKHNSVGFYQMSKIVVTPTIVLAEFILYRKTIPSKKILALAVVSAGVAVPTVSALEFNLFGAIVAIIWIVPSPINKILWSTLQQQGNWTALAMTGESDHVEIESVRAPFLLSGAKVVDGYAQMLVTYDGGNTSWGQMTNSIAQDSNERTPLQARLNKLTSSIGKVGLAVAFLVLLVLRIRYFMGNTEDEKRNKEFQGTKTDINDVLNAIVRIVAAVVTIVVVAIPEGLPLAVTLTLAYSMKRMITSSVYKPSSGFVPEISGSPTEKAILLWAVSDLGMDMDEMKQKHKVLHVETFNSEKKRSGVAIRKENENKVDVHWKGAAELILAMCDN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00229 399 Pfam Cation transport ATPase (P-type) 325 398 - -
Car03g00229 399 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 318 398 IPR023299 GO:0000166
Car03g00229 399 Pfam E1-E2 ATPase 160 311 - -
Car03g00229 399 PANTHER CALCIUM-TRANSPORTING ATPASE 160 312 - -
Car03g00229 399 SUPERFAMILY Calcium ATPase, transduction domain A 156 208 IPR008250 -
Car03g00229 399 Gene3D - 102 311 - -
Car03g00229 399 Gene3D - 312 399 IPR023299 GO:0000166
Car03g00229 399 PANTHER CATION TRANSPORTING ATPASE 160 312 - -
Car03g00229 399 PANTHER CALCIUM-TRANSPORTING ATPASE 313 398 - -
Car03g00229 399 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 314 IPR023298 -
Car03g00229 399 PANTHER CATION TRANSPORTING ATPASE 313 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00229 Car-Chr3 5259994 5262134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00229 313 399 Primary Pumps ATPases AT3G63380 63.218 6.50e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00229 K01537 - qsu:111999079 283.493