Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00228 ATGTATAGCTTTTGCTCATGGAGATTTTGGATTCGGAAGATATGTCCCTTTGGACAAACTTTCGATAGTGCAATGCCTCAGAAAGAAAGGACATGTAGTTGCAGTCACAGGCGATGGCACAAACGATGCACTGTCTCTATGGGAATCCAAAGAACTGAAGTCTCCAAACAAAGTTCCGATATCGTCATCTTAGACGACAACTTCAATTATGTCGCCACTGTTTTAAGATGGGGAAGATGTGTTTACAACAACAATCAAAAATTTATTCAGTTTCAATTAACAGTCAATGTTGCAGCACTTGTCATAAACTTTCTATGGTTCACTTTTTCTTACTAG 336 0.3839 MYSFCSWRFWIRKICPFGQTFDSAMPQKERTCSCSHRRWHKRCTVSMGIQRTEVSKQSSDIVILDDNFNYVATVLRWGRCVYNNNQKFIQFQLTVNVAALVINFLWFTFSY 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00228 111 SUPERFAMILY HAD-like 44 103 IPR036412 -
Car03g00228 111 PANTHER CATION TRANSPORTING ATPASE 45 105 - -
Car03g00228 111 Gene3D - 41 111 - -
Car03g00228 111 PANTHER CALCIUM-TRANSPORTING ATPASE 45 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00228 Car-Chr3 5259587 5259922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00228 45 105 Primary Pumps ATPases AT3G63380 85.246 2.57e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00228 K01537 - gmx:100806797 109.768