Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00226 ATGGCTTCCAACAACAATCTCAAAATCCACGAACACTTCAAAGTTGTTCCTCAATCATCATCAACCCAAACAACAACACTCCCTCTCACATTCTTCGACACACTTTGGCTAAGATTCCATCCAGTAGAACGTATTTTCTTCTACACCCTCCCAAATTCACAATCACACCCCTCTCACTTCTTCCAAAAAATTATTCCAAATCTAAAGTCTTCACTCTCTTTAACCCTCCAGCATTTTCTCCCCTTAGCTGGTAAAATCGTTTGGCCTTCAGAAAAACCAATAATCCAATACACACCAAATGATTCTGTTTCATTGATCATTGCTGAATCTGATTCAGATTTCAACCATGTCATTGAAAATTCACCTCATGAGGCTTCTCTGTCTCGTTCTTTTATACCCCATTTAGAATCAACCGATTCTTTTGCTTCTATTATCTCCATTCAGATAACCCTTTTTCCAAAAAATGGATTTTCCATCGGAATCACCACTCATCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTCATCGAAGCTTGGTCTTATCTAAACAAAAAAACAATTGAAACAGAACAACATTTTCCAACTTTGTTACCAAAGTTAGAACCTTTATTCAATAGAGAAATCATCAAAGACCAAAATGAACTTAGTGATTTATTCATGAATAACTGGAAAAGCTTCTTAACCCAGATGTTCCCAAATGAAAAAGGAAACGAAAAATGCTTGAAAATTTTACCTTTTGAACCAAAACTCAAAGACCATGTTCGTGCAACTTTCAACCTCACACGTGAAGATTTGGATAAAATAAAGAAAAGGGTATTATCAAAATGGGAAAATTTTTACACCAATGAGTCAAAGCCACAAAATTTATCATCTTTTGTTCTTACTTGTGCTTACTCACTCATTTGTATTGCAAAAGCTATTCATGGAGTTGAAAAGGAGAAAGAGAAATTTTCATTTGCTTTCACAGTTGATTGTAGAACAAGGTTAGAACCGTCAATACCAAATAATTATTTTGGGAATTGTGTCTGGGGACGTATGGTTGAATCACAACCGTTGGATTTCATAAAGGAAGATGGTTTGGTTTTAGTAGCTAAAAGTATTTATGATACAATAAAGATGATAAATGAAAAAGGTGTTCTTGAAGGAGCAAATGATGTATTTTCTAAATATGCTTCTTTGGCTAGTGAAAAAGTTGAAATGATAAGTGTGGCAGGGTCTAATAGATTTGGTGTTTATGGAATTGATTTTGGTTGGGGAAAAGCTTCTAAAGTGGAGATAATATCAATTGATAGAGGTTTAACTATTGGTTTGGCAGAAAGCAAAGATGGGAGTGGTGGAATTGAAATTGGACTTGTTCTTAAAAAGAATGTGATGGATCTTTTTAGCACTTTGTTTCATGAAGGATTATGTATTACTTGA 1422 0.3453 MASNNNLKIHEHFKVVPQSSSTQTTTLPLTFFDTLWLRFHPVERIFFYTLPNSQSHPSHFFQKIIPNLKSSLSLTLQHFLPLAGKIVWPSEKPIIQYTPNDSVSLIIAESDSDFNHVIENSPHEASLSRSFIPHLESTDSFASIISIQITLFPKNGFSIGITTHHAVLDGKSSTMFIEAWSYLNKKTIETEQHFPTLLPKLEPLFNREIIKDQNELSDLFMNNWKSFLTQMFPNEKGNEKCLKILPFEPKLKDHVRATFNLTREDLDKIKKRVLSKWENFYTNESKPQNLSSFVLTCAYSLICIAKAIHGVEKEKEKFSFAFTVDCRTRLEPSIPNNYFGNCVWGRMVESQPLDFIKEDGLVLVAKSIYDTIKMINEKGVLEGANDVFSKYASLASEKVEMISVAGSNRFGVYGIDFGWGKASKVEIISIDRGLTIGLAESKDGSGGIEIGLVLKKNVMDLFSTLFHEGLCIT 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00226 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 472 - -
Car03g00226 473 Gene3D - 7 234 IPR023213 -
Car03g00226 473 Pfam Transferase family 13 464 - -
Car03g00226 473 Gene3D - 251 472 IPR023213 -
Car03g00226 473 PANTHER - 2 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00226 Car-Chr3 5082492 5084277 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00226 15 468 Monolignol Biosynthesis Gene Families AT5G48930 22.698 1.28e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00226 - - gmx:100815354 620.928