Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00223 ATGTGTTNNNNNNNNNNTGAACTCATTTTTTTCTACACTCTTCCAAATTCGCAATCACACCCCTCTTTCTTCTTTGAAAAACTTGTTCCAAAACTCAAATCTTCACTCTCTAAAACCCTCCAACACTTCCTCCCTTTGGCTGGTAAAGTCATTTGGCCTTCTGAATCTTCAAAACCCATCATCCAATTCAATCCCAATGATGATGGAGTTTCCTTAATCATAGCACAATGTGAAGATGATGTTGTAGATTTCAATAAAATCTTAGAGTACAATTCACCTCATGAAGCTTCTCTGTCTCGTTCTTTTGTACCTCACTTGGAATCAACATATTCTTTTGCTTCTATTATCTCAATTCAAATAACCCTTTTTCCAAAAAATGGTTTTTGCATTGGAATCAGCACTCACCATGGTATTGTTGATGGAAAATCTTCAACCATGTTCATGAAAGTTTGGGCTTCTATAAGTAAATCTTTAAAAGAAACACAATCACTACCATTTTTGGAACCATTTTGGAATAGAGAAGTAATTAAGGATCCAAATGATTTGGAGAGTTTCTACATAAATACTTGGAATGAAGCCTCATCATTTTTCAATGAGAGCAATATTGTGAGAAGTTTAAAGATTTTGTCACATGCATTTCCACCAAATGTTAATGATTCTGTTCGAGCCACATTCGAGCTTACATTTCAAGATTTGGACAAAATAAACAAAAGGGTGTTGTCAAAGTGGAACATTGTGGAAGTAGAACAAGAAGAAGAACCAAAAATTGAGTCTTTAAAGCCTACAAAATTGTCAACTTTTGTTCTTACATGTGCTTATGTTTCTGTTTGCATAGCAAAGTCATTTCAAGAATGTGAACGTGATAAAAAACCGAAATTTTCTTTTAATTTCTCTGTGGATTGCAGGGCTAGATTAGAGCCCCCAATTCCTGAAAACTATTTTGGAAACTGTATATGTATTCATATAGTGGAAACTGAGCCAGAGGATTTTACAAAAGAAGATGGTTTGGTGATTGTTGCTAAGAAGATTTATGGTAAAACAAAAAAGATGGATAAGGGAGTTCTTGATGGAATTGAGACATTGCTGTTAAGATTTACGGATATGGATGGTGAAGGAATTAAACTAATTGGAGTTTCATGGTCAAATAGGTTTGGAGTATATGAGACTGATTTTGGATGGGGAAGACCTTCAAAAGTGGAGATTACTTCAATTGACAGAGGCTTAACAATTGGATTGACAGACAACAAGGATGTGAAAGGTGGTGTTGAAATTGGACTTGTTCTTGATAAGAATGTGATGAGTGTTTTCCAAACCATTTTTCATGATGGGCAATGCTTCGACTAA 1344 0.346 MCXXXXELIFFYTLPNSQSHPSFFFEKLVPKLKSSLSKTLQHFLPLAGKVIWPSESSKPIIQFNPNDDGVSLIIAQCEDDVVDFNKILEYNSPHEASLSRSFVPHLESTYSFASIISIQITLFPKNGFCIGISTHHGIVDGKSSTMFMKVWASISKSLKETQSLPFLEPFWNREVIKDPNDLESFYINTWNEASSFFNESNIVRSLKILSHAFPPNVNDSVRATFELTFQDLDKINKRVLSKWNIVEVEQEEEPKIESLKPTKLSTFVLTCAYVSVCIAKSFQECERDKKPKFSFNFSVDCRARLEPPIPENYFGNCICIHIVETEPEDFTKEDGLVIVAKKIYGKTKKMDKGVLDGIETLLLRFTDMDGEGIKLIGVSWSNRFGVYETDFGWGRPSKVEITSIDRGLTIGLTDNKDVKGGVEIGLVLDKNVMSVFQTIFHDGQCFD 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00223 447 Gene3D - 3 203 IPR023213 -
Car03g00223 447 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 445 - -
Car03g00223 447 Pfam Transferase family 8 438 - -
Car03g00223 447 PANTHER - 7 445 - -
Car03g00223 447 Gene3D - 217 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00223 Car-Chr3 4993003 4998293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00223 9 437 Monolignol Biosynthesis Gene Families AT5G48930 23.266 2.44e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00223 - - gmx:100813762 484.952