Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00217 ATGGAGCAAAGAAAAATCTTTGTTCATGTAGTGATTTTCTTGGTCATGTTCCTACTTAGAGAAATTAATTATAAAAATGTTgaagcaaaagtagaagaagaagaacatgatagaaTTTTTGAGCTCCCTGGTCAACCTAAGGTTTTATTTCAACAATTTTCTGGCTATGTTACTGTTGATCATGTTGCTGGTAGAGCTCTCTTTTATTGGCTAACTGAAGCTTCTCAAAATCCTCTCAACAAACCCCTTGTCATTTGGCTTAATGGAGGTCCAGGCTGTTCATCAGTGGCATATGGAGCATCCGAAGAGATTGGCCCATTTAGATTGAACAAAACAGCTTCTGGGCTATACATTAACAAGTTTGCTTGGAACACAGTGGCCAACCTTTTATTTTTGGAAGCTCCGGCCGGCGACTCTCTTGAATTTATAATCCAGTGGCTAGATAGATTCCCACGTTATAAGAATCGGGAACTTTATATTACAGGAGAGAGCTACGCAGGACATTATGTCCCTCAATTAGCTAAAGAAATCATGACCTACAACATAAAAGCCAAGCAACTCATCAATCTCAAGGGAATAATGGTTGGGAATGCAGTGACGGACAACTATTATGATAATTTGGGCACAGTGACGTACTGGTGGAGCCATGCTATGATCTCCGATCAAACATATAGACAACTCATTAGCACTTGTGATTTTCATCATCAAAAGGAATCCGATGAATGTGAGTCTCTATATAGTTATGCCATGGATCAAGAATTTGGTAACATTGATCAGTACAATATCTATGCTCCTCCATGTAACAATTCTGATGGTAGTTTGTCCAGTACTCGCCACGCCATTCGCTTGCCCCACCTGCCCAATTTGGCTTTTAAGAAATTGGCTGGTTATGATCCATGTACGGAAAAGTATGCAGAGGTTTACTACAATAGGCCAGATGTTCAAAAAGCACTTCATGCTAACACAACAGGCATTTCTTATAAGTGGACTGCTTGCAGTGAAGTTTTGAATAGAAATTGGAATGATACAGATGTATCTGTTCTTCCAATTTATAGAGAGTTGATAGCTCATGGAGTCAGAGTTTGGGTGTTCAGTGGGGATGTAGACTCAGTGGTTCCAGTTACAGCAACAAGATATGCCCTTGCACAACTTAAGTTGGCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGATGGACAGAGGTGTATGAAGGGCTAACATTTGCAACAGTGAGAGGGGCAGGTCATGAAGTCCCACTGTTCAAGCCTAGAGCTGCCCTTCAATTATTCAAATCATTCCTTGCAGGAAAGCCTCTTCCAAAAGTCCTAAAATAG 1350 0.3948 MEQRKIFVHVVIFLVMFLLREINYKNVEAKVEEEEHDRIFELPGQPKVLFQQFSGYVTVDHVAGRALFYWLTEASQNPLNKPLVIWLNGGPGCSSVAYGASEEIGPFRLNKTASGLYINKFAWNTVANLLFLEAPAGDSLEFIIQWLDRFPRYKNRELYITGESYAGHYVPQLAKEIMTYNIKAKQLINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLISTCDFHHQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSLSSTRHAIRLPHLPNLAFKKLAGYDPCTEKYAEVYYNRPDVQKALHANTTGISYKWTACSEVLNRNWNDTDVSVLPIYRELIAHGVRVWVFSGDVDSVVPVTATRYALAQLKLATKIPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKVLK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00217 449 ProSitePatterns Serine carboxypeptidases, histidine active site. 411 428 IPR033124 GO:0004185
Car03g00217 449 Gene3D - 300 337 - -
Car03g00217 449 Gene3D alpha/beta hydrolase 33 137 IPR029058 -
Car03g00217 449 Gene3D alpha/beta hydrolase 138 269 IPR029058 -
Car03g00217 449 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 25 13 137 - -
Car03g00217 449 Pfam Serine carboxypeptidase 137 440 IPR001563 GO:0004185|GO:0006508
Car03g00217 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Car03g00217 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 171 IPR001563 GO:0004185|GO:0006508
Car03g00217 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Car03g00217 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Car03g00217 449 ProSitePatterns Serine carboxypeptidases, serine active site. 160 167 IPR018202 GO:0004185
Car03g00217 449 SUPERFAMILY alpha/beta-Hydrolases 41 445 IPR029058 -
Car03g00217 449 Gene3D - 347 441 - -
Car03g00217 449 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 25 136 446 - -
Car03g00217 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 137 IPR001563 GO:0004185|GO:0006508
Car03g00217 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 136 446 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00217 Car-Chr3 4866193 4876972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00217 305 444 Calmodulin-binding Proteins AT2G22960 31.206 9.24e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00217 K16297 - gmx:100807680 790.801