Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00180 ATGTCCACCTTCTACTCTCTCCCTAGGTGGATTGGAGGAAAATTGTTGGGAAGGAATCCCAAGAGCACAATCAACAACGTTGgtgacagtaacagtgacactactggagttgtcgtcgtgacagatgacaatccagtgacaAGCGTGGTGGAGTGTTATGCCTGTACACAAGTAGGTGTACCGGTGTTTCACTCCACCAGCTGCGATAGCTGTCACCAACCCGAATGGGAAGCATCAGCGGGTTCTTATCTTGTTCCAATTCAAAACCGACCCGGAAAATTCGCAAGAGCAGTTACAAGGGCAAATTGGGGACCGTTAGGATCCGTTTTAGATCCAAGAAGCAAGCGCGTGCAGATATGGAACCGCGTGTTGTTGTTGGCGCGTGGAGTTGCGTTGGCTATAGACCCGTTGTTTTTCTACGCGCTATCGATAGGGAGAGAAGGTTCGCCGTGTCTTTATATGGACGGTGGTTTGGCGGCGATGGTTACGGCGGCGCGTACGTGTGTTGATGCGGTGCATTTGATACATGTGTGGTTGCAGTTTAGATTAGCGTATGTGTCGAGAGAATCGCTTGTTGTTGGGTGTGGAAAACTCGTGTGGGACGCACGTACCATTGCTTCTCATTATCTTAGAAACTCAAAGGGTTTTTGGTTCGATCTTTTTGTTATTCTTCCGGTGCCTCAGGCTGTGTTTTGGCTAGTAGTACCAAAATTGATAAGAGAAGACAAGATTAAAATCATTATGACCACAATGCTATTAATTTTTTTGTTCCAATTTCTCCCTAAAGTTTACCATAGCATATGCATGATGAGAAGAATGCAAAAAGTCACTGGCTACATCTTTGGCACCATTTGGTGGGGTTTTGGACTCAATCTCATAGCTTATTTCATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCTATTCAACGCGTAGCATCATGCCTTCAACAGCAATGTGACAGAACTATTGGATGCAATCTATCTCTGTCATGTTCAGAGGAGGTATGCTATCAGTCTTTGTTATCACCAGGAACCATTGGAAATCCATGTGGTGGAAACTCAACATTGATGATAAGTAAGCCTTTGTGCTTAGATGTTGACGGACCTTTCAAATATGGAATCTACCAATGGGCACTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTGCTGAGTGGACTGCTACTTTTCACTTTGTTGATTGGTAACATTCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGCCGTGACATGGAATGGTGGATGAAGAGGAGGCAGTTGCCGTCCCGATTAAGACAAAGAGTTCGGCATTTCGAACGTCAAAGATGGGTAGCTATGGGAGGAGAAGATGAGATGGAATTGATCAAAGACTTACCTGAGGGTCTTAGGAGAGACATCAAGCGCTATCTTTGCTTGGATCTCATTAAAAAGGTACCATTGTTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGATAGGGTAAAGCCCCTAGTCTTCTCTAAAGATGAAAAGATAATTAGAGAAGGTGATCCTGTACCAAGGATGGTATTCATTGTTCGAGGACGCATTAGAAGAAACCAAAGTCTCAGCAAAGGAATGGTAGCAACTAGTGTCCTCGAACCAGGAGGGTTTTTAGGGGATGAACTACTTTCTTGGTGCCTTCGACGCCCTTTTATCGACCGTCTTCCAGCCTCCTCAGCAACATTTATATGCCTTGAATCAACAGAAGCATTTGGTCTTGATGCTCAAAACTTGAGATACATAACTGATCATTTCCGCTACAAATTCGCGAACGAGAGGCTAAAGAGAACAGCAAGATACTACTCATCCAATTGGAGAACATGGGCTGCAGTTAACATTCAACTTGCATGGCGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACTCCTGTAAGGGAAATTGGCGGCTCGGAGCGCAGGCTCTTGCAGTATGCTGCAATGTTCATGTCACTTAGGCCACATGATCATCTTGAATGA 2139 0.4329 MSTFYSLPRWIGGKLLGRNPKSTINNVGDSNSDTTGVVVVTDDNPVTSVVECYACTQVGVPVFHSTSCDSCHQPEWEASAGSYLVPIQNRPGKFARAVTRANWGPLGSVLDPRSKRVQIWNRVLLLARGVALAIDPLFFYALSIGREGSPCLYMDGGLAAMVTAARTCVDAVHLIHVWLQFRLAYVSRESLVVGCGKLVWDARTIASHYLRNSKGFWFDLFVILPVPQAVFWLVVPKLIREDKIKIIMTTMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQQCDRTIGCNLSLSCSEEVCYQSLLSPGTIGNPCGGNSTLMISKPLCLDVDGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHFERQRWVAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIRRNQSLSKGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFICLESTEAFGLDAQNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWRRYRQRTRGPVTPVREIGGSERRLLQYAAMFMSLRPHDHLE 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00180 712 Gene3D Helix hairpin bin 451 516 - -
Car03g00180 712 SUPERFAMILY Voltage-gated potassium channels 111 446 - -
Car03g00180 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 55 712 - -
Car03g00180 712 Gene3D - 153 448 - -
Car03g00180 712 ProSiteProfiles cAMP/cGMP binding motif profile. 525 635 IPR000595 -
Car03g00180 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 55 712 - -
Car03g00180 712 Pfam Ion transport protein 118 443 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car03g00180 712 SMART cnmp_10 525 651 IPR000595 -
Car03g00180 712 SUPERFAMILY cAMP-binding domain-like 452 639 IPR018490 -
Car03g00180 712 CDD CAP_ED 525 635 IPR000595 -
Car03g00180 712 Gene3D Jelly Rolls 523 641 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00180 Car-Chr3 4035173 4041910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00180 43 712 Ion Channels AT5G15410 79.148 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00180 K05391 - gmx:100798823 1237.25