Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00179 ATGGGGTTGAAATTCTCAAAGCAGGAACCGCCACCCAAAATGAATAGTCCAAGTTTGGAATTGCATCATCGCATGATCAGTTATCTTACCAAGAATTTTATACGTAACTTGGTATCCAAGCAAAGGAGAAGAATGCTTATTGCTGGTTATGATCTTGATATGTCATATATCACAGATAGAGTGTTAGCTATGTCATTTCCTGCAGAACGTATGAGAGCAATGTATAGAAATCCTCTCTGGCAGGTTAAATCTGTGTTGGATATGAGACATCAAGAACATTATAAGGTCTATAATCTCTGTATAGAAGAGAATTATGATCCAGCACAATTCTATGGTCGTGTCGAAGCATACCCTTTTGATGACAATCATGTTCCATCTCTTGAAATGGTCAAAGCTTTCTGTGAAAGTGTGGATTCATGGCTGTCACGTGACCCCAAAAATATTGCTGTTATTCATTGCATGGCAGGTAAAGGTAGAACTGGTTTGATGGTTAGTTCATACCTAACTTATTGCGGCATGTCAGCAGAAGAGGCTCTTCAATTATATGCAGATAGAAGGACAACCAATAATGAAGGAGTATCAATACCAAGCCAACGTCGTTATGTAGGGTACTGGGAAAGTCTACTTTCTGTCCCTAGAGGAACTGGATATGGATCGCCGAACGTGAATTTGCCTCAACAATGTAGCAGAGAATTACGGCGAATTCGGCTGTATGATACTGTCAACATTGACACTATTTTCTTTGTTATATCAGAACTGCAGGAGATTCCAAATGAGGTGTATCGTCCAGCAGTGGAAATTTACAGGAGCTGCTGCAGAGAGGTTAAGAAAGGTTATCAGAGAACTAACAGCCCTCGCTATTATATTTCTATTCCTGAAAGTGATGAAGATGGAATACAATCAGAAATAGAAGAGCGGCAAGAGCCTCGTGTTGTAGTTCAAATGGACACAGAGAGTCCTGCAATATACCAGAAATCTTGTTTGGACCATTATTTTGATAAACCTATACAGGTAACTGGAGATGTACGTGTGATATTCTATGAGAAAATGATTGGAGGCCGTCTTTTCTACTGCTGTTTTAATACATCTTTTATTAGGAACAGCTTACTACAGCTCACAGTAAAGGACTTGGACAAAGTAGGGAAGAAAGGAAAATCAATATGTGGCCCGACATTCGGCTTAGAATTACTGTTTGGTCCTGCTAATACAGGATTTTCCTCCTCAAGTATATCTATCAGTGACAATTCTAGTGATGATTCACTATAA 1266 0.3926 MGLKFSKQEPPPKMNSPSLELHHRMISYLTKNFIRNLVSKQRRRMLIAGYDLDMSYITDRVLAMSFPAERMRAMYRNPLWQVKSVLDMRHQEHYKVYNLCIEENYDPAQFYGRVEAYPFDDNHVPSLEMVKAFCESVDSWLSRDPKNIAVIHCMAGKGRTGLMVSSYLTYCGMSAEEALQLYADRRTTNNEGVSIPSQRRYVGYWESLLSVPRGTGYGSPNVNLPQQCSRELRRIRLYDTVNIDTIFFVISELQEIPNEVYRPAVEIYRSCCREVKKGYQRTNSPRYYISIPESDEDGIQSEIEERQEPRVVVQMDTESPAIYQKSCLDHYFDKPIQVTGDVRVIFYEKMIGGRLFYCCFNTSFIRNSLLQLTVKDLDKVGKKGKSICGPTFGLELLFGPANTGFSSSSISISDNSSDDSL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00179 421 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 308 400 IPR035892 -
Car03g00179 421 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 49 209 IPR029021 -
Car03g00179 421 Pfam Tyrosine phosphatase family 131 183 IPR026893 GO:0004721
Car03g00179 421 CDD PTP_PTEN 53 208 IPR045101 GO:0016791
Car03g00179 421 PANTHER BNAC03G16750D PROTEIN 1 403 - -
Car03g00179 421 SMART PTEN_C2_2 225 400 IPR014020 -
Car03g00179 421 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 131 186 IPR000387 GO:0016311|GO:0016791
Car03g00179 421 Pfam C2 domain of PTEN tumour-suppressor protein 321 398 IPR014020 -
Car03g00179 421 ProSiteProfiles C2 tensin-type domain profile. 243 401 IPR014020 -
Car03g00179 421 Gene3D - 263 403 - -
Car03g00179 421 ProSiteProfiles Phosphatase tensin-type domain profile. 43 212 IPR029023 -
Car03g00179 421 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 403 - -
Car03g00179 421 Gene3D Protein tyrosine phosphatase superfamily 29 211 IPR029021 -
Car03g00179 421 ProSitePatterns Tyrosine specific protein phosphatases active site. 151 161 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00179 Car-Chr3 4022631 4029957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00179 1 405 Protein tyrosine phosphatase (PTP) family AT5G39400 67.241 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00179 K01110 - gmx:100809938 702.975