Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00177 ATGGAGAATCCACAAACATCCAAAGACAATTATGTCCTCAATGCCATGGTACTAGGTGCCAACTTGGTGTTTCCTGCAGTTCTTAATGCTGCAATGGAACTCAACTTGTTTAACATTATTGCCAAAGAAATTAGCTCACAAGATGATAACAATAAAGGTGGATTCATTTCAACTTTTGAAATTGCTTCAAAGTTATCAACACAACACTCTGAGTTGCCAAATAGGCTCGATCGTATGTTGCGCTTGCTTGCTAGCTACTCTCTTTTGTCTGTATCAACTCGAACCAATGATGATGATGGTAACATTGTTAGATTTTATGGAATCACATCTTTGGGAAAATACTTTGTTAGTTATGACAACAATGATGATTATTTGGGCTCAATGATATCATACATGTGTCACCCTACTCTCTTAGGAGTGTGGTTGAATCTCAAGGAAACAATTATGGAGTCAGAGATTGATCTATTCAAAAAAGTCCATGGAATATCTATCTATGATTATTTTGAAAAAGATCCACAAATAAACGAAATATTTAATAAATCAATGACTGAAACATGTACAGCTCATATGAAAGGAATCCTTGAAATATACAAAGGATATGAAGGACTAACAACACTAGTTGATGTAGGAGGTGGAAATGGACAAAGCCTCAAAATGATTTTGTCTAAATATCCATCAATAATCAAGGCAATCAATTTTGATCTTCCTCAAGTGATTGAAAATGCACCACCCTTTTCAGGTATTGAACATGTTGGAGGAAATATGTTTGAATGTGTTCCACAAGGAGATGCCATAATGCTTAAGTTTGTGTGCCATAATTGGTCGGACGAAAAATGCTTAGAAATTTTAAGCAATTGTCACAAAGCTTTGCCTCCAAAAGGTAAAGTCATTCTTGTGGAGTTCATATCACCAGAAGATTCAGAATCAACAAATATATCTTATAAGCTGACTTCAACTATTGATATGATGTTTATCACTACTGGTGGAAGGGAAAGAACCCTAAAAGAATATGAAAATTTGAGTAAAAGCTCTGGATTTTCTAAACTTGAAGTTGTTTGTCTTGTTTTCTCTATCCTTGGAGTGATACAAATAAATAATTATATAATTTCAATAGTAGTTGGTCTTGCATGCCAATTTTATTAA 1143 0.3403 MENPQTSKDNYVLNAMVLGANLVFPAVLNAAMELNLFNIIAKEISSQDDNNKGGFISTFEIASKLSTQHSELPNRLDRMLRLLASYSLLSVSTRTNDDDGNIVRFYGITSLGKYFVSYDNNDDYLGSMISYMCHPTLLGVWLNLKETIMESEIDLFKKVHGISIYDYFEKDPQINEIFNKSMTETCTAHMKGILEIYKGYEGLTTLVDVGGGNGQSLKMILSKYPSIIKAINFDLPQVIENAPPFSGIEHVGGNMFECVPQGDAIMLKFVCHNWSDEKCLEILSNCHKALPPKGKVILVEFISPEDSESTNISYKLTSTIDMMFITTGGRERTLKEYENLSKSSGFSKLEVVCLVFSILGVIQINNYIISIVVGLACQFY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00177 380 Gene3D Vaccinia Virus protein VP39 175 354 IPR029063 -
Car03g00177 380 SUPERFAMILY "Winged helix" DNA-binding domain 12 118 IPR036390 -
Car03g00177 380 Pfam O-methyltransferase domain 141 347 IPR001077 GO:0008171
Car03g00177 380 CDD AdoMet_MTases 205 299 - -
Car03g00177 380 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Car03g00177 380 Pfam Dimerisation domain 27 84 IPR012967 GO:0046983
Car03g00177 380 PANTHER O-METHYLTRANSFERASE 8 364 IPR016461 GO:0008168
Car03g00177 380 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Car03g00177 380 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 8 364 - -
Car03g00177 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 357 IPR029063 -
Car03g00177 380 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 366 IPR016461 GO:0008168
Car03g00177 380 Gene3D - 23 193 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00177 Car-Chr3 4001609 4004758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00177 5 358 Monolignol Biosynthesis Gene Families AT5G54160 46.944 3.04e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00177 K13066 - gmx:100798295 447.973