Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00173 ATGTccaccaccaactcgaccgacgccgacacgccaccacaacaaccaccgcgtcccacgatcaccctcccaccacGTCCCTCCGTGGAAGCATTCTTCGCCGGCGCCGCCAGTCCTGGACCTATGACACTAGTTTCGAGCTTCTTCGCCACCGAATCCGCCACCTTCTCTCAGCTTCTCGCCGGTGCCATGGCTTCTCCTCTCGCTTTCTCAACCGCCGTCGATAGTAAAGAAGATGATGGGACCTACAGGTTCAAACAGAGTAGACCTATGAACTTGGTCATTGCTCGTTCTCCAGTTTTCACTATTCCTCCTGGTTTGAGTCCTTCTGGTTTTCTTAACTCACCTGGTTTCTTTTCTCCTCAGAGTCCCTTTGGGATGTCACACCAACAGGCTTTAGCACAAGTTACAGCTCAAGCTGTCCTAGCACAATCTCATATGCACATGCAACCTGATTACCAGCCAGTCTCACTAGATTACCAGCCGGTCTCACTTGAAGCTCCAACCGAACCACCAGTAGAGAACCCATCTTTTACTCGAAATGAAACTTCAGAGGTGCAAGTAGTAGCACCTATATCAGAACCTAGAAATGCTCAAACGGAAACGTCAGAGCTTTCGTATTCTGATAAGAAACAGCAACCATCTTCATTACCAATTGACAAACCTGCAGATGATGGCTACAACTGGCGTAAGTATGGACAGAAGCAGGTTAAGGGGAGCGAGTATCCGCGGAGCTACTACAAATGCACGCATCTGAATTGTCCCGTGAAGAAAAAAGTTGAGCGTGCTCCTGATGGTCATATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAGAAGCCGCAAGCAAATCGGCGCATCAAAGATAATAGTGACGTGAATGGAAATGCTAATGTTCAACCTAAGTCTGACTCAAACTCACAAGGTTGGTTTGCAAATTCAAACAAAACTAGTGAAAGTGTGCCTGATTGTTCTGTGGTTGAGAGTGACCAGACCTCTAACCAAGGCGCTCCTAGGCCATTGCCTGGATTGAGTGAGAGTGAGGAAGTTGGTGATGCAGGCAATAAGGAAGAGGGAGATGACTGTGAGCCAAACCCTAAGAGAAGGAGCATTGAACCTGTGGTTCCTGAAGTACCTCTATCTCAGAAGACTGTCACAGAACCCAAAATCATTgtgcaaacaagaagtgaagttgatcttttggatgacggctacaggtggcgaaagtatggtcagaaagtggtgaagggaaatcctcatccaagGAGTTATTACAAGTGCACTAGTGCAGGCTGCAACGTGCGTAAACATGTCGAGAGAGCATCAACAGACCCAAAAGCTGTCATAACTACATATGAGGGAAAACATAACCACGACGTCCCTGCCGCTAGACACAGCAGCCACAACACAGCCAGTAGCAATTCGATGCCATCAAAACCGCAGCCTGTGGCAGCAGAGAAGCATCCTTTGCTTAAAGATATGGAGTTCGGAAACAACAATCAGAGACCTGTACATTTACGCTTAAAAGAAGAGCAAATCATCGTATAA 1551 0.4159 MSTTNSTDADTPPQQPPRPTITLPPRPSVEAFFAGAASPGPMTLVSSFFATESATFSQLLAGAMASPLAFSTAVDSKEDDGTYRFKQSRPMNLVIARSPVFTIPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQPDYQPVSLDYQPVSLEAPTEPPVENPSFTRNETSEVQVVAPISEPRNAQTETSELSYSDKKQQPSSLPIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPQANRRIKDNSDVNGNANVQPKSDSNSQGWFANSNKTSESVPDCSVVESDQTSNQGAPRPLPGLSESEEVGDAGNKEEGDDCEPNPKRRSIEPVVPEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARHSSHNTASSNSMPSKPQPVAAEKHPLLKDMEFGNNNQRPVHLRLKEEQIIV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00173 516 MobiDBLite consensus disorder prediction 458 501 - -
Car03g00173 516 PANTHER WRKY PROTEIN 13 515 - -
Car03g00173 516 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 515 IPR044810 GO:0003700
Car03g00173 516 SMART WRKY_cls 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 SMART WRKY_cls 402 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 Gene3D WRKY domain 387 463 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 Gene3D WRKY domain 212 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 MobiDBLite consensus disorder prediction 289 341 - -
Car03g00173 516 MobiDBLite consensus disorder prediction 465 481 - -
Car03g00173 516 ProSiteProfiles WRKY domain profile. 397 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 ProSiteProfiles WRKY domain profile. 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 SUPERFAMILY WRKY DNA-binding domain 394 462 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 MobiDBLite consensus disorder prediction 258 374 - -
Car03g00173 516 MobiDBLite consensus disorder prediction 258 288 - -
Car03g00173 516 MobiDBLite consensus disorder prediction 1 26 - -
Car03g00173 516 MobiDBLite consensus disorder prediction 174 215 - -
Car03g00173 516 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 Pfam WRKY DNA -binding domain 403 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00173 516 MobiDBLite consensus disorder prediction 165 240 - -
Car03g00173 516 SUPERFAMILY WRKY DNA-binding domain 222 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00173 Car-Chr3 3937883 3944481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00173 18 514 WRKY Transcription Factor Family AT2G03340 51.977 8.56e-145 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g00173 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00173 - - gmx:100796679 796.193