Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00172 ATGGGTTGTGTAAACTCCAAGAAAACGGTGGCTGACGGTGCTGTTACACCGTTGGGACCATATGTTCATTCGAGTTCTCGAAAAAGGAACAATGGTGGTGGTGGTTCTGGGAGAAGCATGGCGGTGGAGAATTCTTGTTCTTCTTATTCTTCAAGAAAAGGAGATTGTGGGGCCCAACAATGTGACCTGAAATCAGAGGAGTGGAAAAGGGGTAGTTTGAATATGAGGATTGGTTTTTCACATAGGTTTGTTGAAGGTGAACAGATTGCTGCTGGTTGGCCTTCTTGGCTTACTTCTGTTGCTGCTGAAGCCATCCATGGTTTGGTCCCTCTCAAAACTGATTCTTTTGAGAAATTAGATAAGATTGGACAAGGTACATATAGCAGTGTTTTCCAAGCACGCGAAGTCGAGACAGGGAGGATGGTTGCCTTGAAGAAGGTGCGGTTTGACACACTTCAACCCGAGAGCATTAGGTTCATGGCACGAGAGATAATAATTCTCCGCACGCTTGACCACCCTAACATCATGAAATTAGAGGGTATAATCACTTCACAACTATCAAATACTATATACCTTGTATTTGAATACATGGAGCATGATCTTGCTGGCTTAGTATCTAACCCTGATATCAAGTTCACAGACTCGCAGATAAAATGTTACATGAGACAGTTATTGAGTGGACTTGAGCAGTGTCACTTACGAGGTATCATGCATCGAGACATTAAAGTATCGAATATATTAGTTAACAATGAAGGAGTTCTCAAGATAGGAGATTTTGGATTAGCGAATACCGTAAGTCCAAATAGCAAGCACCCTTTAACGAGTCGTGTGGTGACTCTATGGTATCGTCCTCCCGAGCTTTTGATGGGATCGACAACCTATGGAGTTTCAGTGGATCTATGGAGTGTTGGGTGTGTGTTTGCCGAACTTTTTATGGGTAAACCCATCCTTAAAGGGAGAACCGAGGTGGAACAATTGCACAAAACTTTTAAGCTTTGCGGGTCTCCACCTGAAGAGTATTGGAAAAAGACTAAGCTTCCGCTTGCAACAATGTTTAAGCCTCAGACTAGTTACGAAAGCTCGCTTTGGGAGAGGTGTAAAGATTTTCCTCCAACTGCTGTGAACCTACTTGAGACCTTACTGTCCATCGATCCTTCTAAACGTGGTACTGCCTCCTCGGCACTTATGTCCGAGTATTTCAACACCGCGCCATATGCCTGTTCTCCATCACTCTTGCCAAAGTATCAACCAAGCAAAGAAATGGATGCTAAAAACCGTGAAGCTATGAACAGGAAAAAGATCGGAGGTAAAGTGCGAGAGCGGGATGCTGTAACATCAGGAAGGCAAAGACGGGTCCACAAAGTTCTTCAGGATCCTAAAAGTGTAAACAAACCAGCTTTGAAAGAGGAAATGCAGAATATTTCTCAAAATGCTTGTAGAGATAACGGCGATGGTAAAGCATATCATACAAAGGGAAAAGTAGGAGCTATACACAAAGAGCAACATAAAAAATTATATGATACAAAAGCAGAGGCTGCACAAATGGTCAATGGTGGTTACAATGGCTATAGCGCATACTCGGGACCGGCACCAGTCACAGGATCTAGCGGCTTTACATGGGCGAATAGACGAAATACTTCATCCATATTATCAGATGGTTCAAGAAGCAAAGTAAGTGCAATGGATCCAACCTTTGCAAAAGGCACTTACGATTTAACGAAACACGGGATAGAAGTTTCGAAAAGAAAACATAATTACAACACAAGCTATGGGGGGGACGAGACATCGAAGCATGTATTTCAAAGGCACCAGGGTCGTAATGGTCAACAATCGTTTGATGTAGCTGATATTTACCATTCCAATTATTACATGGATTTTGATCTCACAGATAAAACAGATGGTCCAATAAATGCACAAGGCCATAGAAATTATGGTGAATTTGTGGAAGAATCAGTACCAACTATGATTCAAACAAATAAAAATGATGAGATGTTACATTGGAATGAAAGTAATGTGTGGCGGCAATCTACCCGTAAATCAAGGTTGGGAAGAGACAAATGA 2061 0.4212 MGCVNSKKTVADGAVTPLGPYVHSSSRKRNNGGGGSGRSMAVENSCSSYSSRKGDCGAQQCDLKSEEWKRGSLNMRIGFSHRFVEGEQIAAGWPSWLTSVAAEAIHGLVPLKTDSFEKLDKIGQGTYSSVFQAREVETGRMVALKKVRFDTLQPESIRFMAREIIILRTLDHPNIMKLEGIITSQLSNTIYLVFEYMEHDLAGLVSNPDIKFTDSQIKCYMRQLLSGLEQCHLRGIMHRDIKVSNILVNNEGVLKIGDFGLANTVSPNSKHPLTSRVVTLWYRPPELLMGSTTYGVSVDLWSVGCVFAELFMGKPILKGRTEVEQLHKTFKLCGSPPEEYWKKTKLPLATMFKPQTSYESSLWERCKDFPPTAVNLLETLLSIDPSKRGTASSALMSEYFNTAPYACSPSLLPKYQPSKEMDAKNREAMNRKKIGGKVRERDAVTSGRQRRVHKVLQDPKSVNKPALKEEMQNISQNACRDNGDGKAYHTKGKVGAIHKEQHKKLYDTKAEAAQMVNGGYNGYSAYSGPAPVTGSSGFTWANRRNTSSILSDGSRSKVSAMDPTFAKGTYDLTKHGIEVSKRKHNYNTSYGGDETSKHVFQRHQGRNGQQSFDVADIYHSNYYMDFDLTDKTDGPINAQGHRNYGEFVEESVPTMIQTNKNDEMLHWNESNVWRQSTRKSRLGRDK 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00172 686 Gene3D Phosphorylase Kinase; domain 1 107 198 - -
Car03g00172 686 PANTHER CELL DIVISION PROTEIN KINASE 57 577 - -
Car03g00172 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Car03g00172 686 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Car03g00172 686 SUPERFAMILY Protein kinase-like (PK-like) 110 405 IPR011009 -
Car03g00172 686 MobiDBLite consensus disorder prediction 15 43 - -
Car03g00172 686 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00172 686 Gene3D Transferase(Phosphotransferase) domain 1 199 439 - -
Car03g00172 686 MobiDBLite consensus disorder prediction 23 43 - -
Car03g00172 686 PANTHER CYCLIN-DEPENDENT KINASE 57 577 - -
Car03g00172 686 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00172 686 CDD STKc_CDK9_like 116 400 - -
Car03g00172 686 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00172 Car-Chr3 3924554 3931247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00172 113 457 Core Cell Cycle Gene Families AT5G10270 45.983 2.09e-104 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Car03g00172 Pkinase 6.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00172 - - lja:Lj1g3v2982400.1 972.23