Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00166 ATGGCAGCTTGTGTATTCACCGTCTCACAAGATGGAACCGGAGATTTTCAAACGGTGCAGGAAGCAATCGACGCTGTGCCGTTTGGCAACAATCGTCGGACTGTGATCCGGGTTTCTCCGGGAATCTACCGGCAGCCGGTGTACGTTCCCAAAACTAAGAATTGCATCACTCTTGCTGGTCTGTGTCCTGAGGATACTGTGCTTACTTGGAATAACACTGCCAATGGAATCGATCACCATCAACCAGCTAGGGTGATTGGAACTGGGACATTTGGTTGTGGAAGTACCATTGTGGAAGGAGAGGATTTCATTGCTGAGAATGTCACTTTTGAGAATTCTTCCCCTCAGGGTTCAGGACAGGCAGTGGCAATTAGAGTAACGGCAGATCGTTGTGCTTTCTACAATTGCAGGTTCCTTGGATGGCAGGACACGCTGTACTTACATTATGGTAAACAATATCTGAAAGATTGCTATATTGAAGGAAGCGTGGACTTTATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGTCACATCCATTGCAAGTCTGAAGGGTTCATAACTGCACAGGGTAGAAAATCATCGCAGGAATCAACAGGTTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGGAAATTCATACGCGTATCTTGGACGACCGTGGGGACCTTTTGGAAGGGTGGTTTTTGCATACACTTATATGGATCCATGTATAAGACAAGTTGGCTGGGATAATTGGGGGAAAGTAGAGAATGAGAGGAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCAACGAATCGAGTAACATGGTGTAGAGAATTGGTGGATGAAGAAGCGTTGCAGTTCATCATGCATCCTTTCATTGATCCTGAACCAGATAGACCATGGCTTGCTCAAAGAATGGGATTGAGGATTCCATATTCTGCTTAG 951 0.4522 MAACVFTVSQDGTGDFQTVQEAIDAVPFGNNRRTVIRVSPGIYRQPVYVPKTKNCITLAGLCPEDTVLTWNNTANGIDHHQPARVIGTGTFGCGSTIVEGEDFIAENVTFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQGRKSSQESTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYMDPCIRQVGWDNWGKVENERSACFYEYRCFGPGCCPTNRVTWCRELVDEEALQFIMHPFIDPEPDRPWLAQRMGLRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00166 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Car03g00166 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Car03g00166 316 Gene3D - 3 308 IPR012334 -
Car03g00166 316 PANTHER PECTINESTERASE 1 315 - -
Car03g00166 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Car03g00166 316 SUPERFAMILY Pectin lyase-like 2 302 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00166 Car-Chr3 3711762 3718262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00166 5 307 Carbohydrate Esterase AT5G47500 39.297 6.15e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00166 K01051 - gmx:100786786 625.55