Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00158 ATGGGATCAATGGAGAATGTTTCCGTACCAAAAATGGAAGAGGAAAAGTTTGAATTTCCAGTTGGTTTTCGATTCCATCCAACAGATGAAGAACTCATAAATCAATACCTTGTCAAGAAGGTTGATTACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCTGAGTTGGCTAAAATGGGAGAAACAGAATGGTATTTTTTCTGTATGAGGGACAGAAAATACCCAACTGGTCAAAGGACAAACAGGGCTACTCTTGCCGGCTATTGGAAGGCCACAGGCAAAGACAGAGAGATTTTCAAGGAAAATGCATTAATTGGGATGAAGAAAACACTGGTTTTCTACAAGGGAAGAGCCCCAAAAGGTGAAAAAACCAATTGGGTCATGCATGAATTCAGATTGGATGGTATCAATCTTTCCGAGCAAAATCTATCCAAACCAGGAATGGGTGAATGGGTTATCTGCAGAGTCTATGAGAAGGGTGATTATGGAAAGAAAGTGCATGGTCCAAAACTTGGAAGGTTTGACTCTAAAGAAGGAGCATCAACTACTAATTCACTGTTGCCTCCATTGATGGATTCTTCTCTATACAAAAGCGAAACAAAGTTCACTACTGGTGAGTTCTCTCCGGTGAATTCTTTCTCCATTCCAAATCAAACTCAGAATCAGAAAACACTAGATGACATTGTTGATAACAATGGAACTAGTATCTTGAACATTTCATGCTCTTCAAAAGCCATTGATGATTACCCTCTAGCTGAAGCAGCATTTGCAGTCTCCAATCAATCTTCACAGGTTGCACCCCAGATTGGGAATCCACAGTATTCAAATTGCTTTTTGTCTCAAGAACAGTCCATGTTGAGGATGCAGCTGGAGAATGAGAATCTTGAATCAAGTGCAAAGCAATGTGTAAAAGCAGATTTCTCTGTAGGGAGAGATTTTGATAGTGATATCTCCTCAGTGGTGTTTGGAAGGGACATACTTCAGAGGTGGTTTGGAAATCCAGAATTATCACCAGCTTCTACAGGGCCTGTGGTCACTGATAGCTTGTGGAATTTCTGA 1092 0.4029 MGSMENVSVPKMEEEKFEFPVGFRFHPTDEELINQYLVKKVDYNSFCAIAIAEVDMNKCEPWDLPELAKMGETEWYFFCMRDRKYPTGQRTNRATLAGYWKATGKDREIFKENALIGMKKTLVFYKGRAPKGEKTNWVMHEFRLDGINLSEQNLSKPGMGEWVICRVYEKGDYGKKVHGPKLGRFDSKEGASTTNSLLPPLMDSSLYKSETKFTTGEFSPVNSFSIPNQTQNQKTLDDIVDNNGTSILNISCSSKAIDDYPLAEAAFAVSNQSSQVAPQIGNPQYSNCFLSQEQSMLRMQLENENLESSAKQCVKADFSVGRDFDSDISSVVFGRDILQRWFGNPELSPASTGPVVTDSLWNF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00158 363 Pfam No apical meristem (NAM) protein 20 144 IPR003441 GO:0003677|GO:0006355
Car03g00158 363 SUPERFAMILY NAC domain 16 170 IPR036093 GO:0003677|GO:0006355
Car03g00158 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 360 - -
Car03g00158 363 Gene3D NAC domain 28 174 IPR036093 GO:0003677|GO:0006355
Car03g00158 363 ProSiteProfiles NAC domain profile. 19 170 IPR003441 GO:0003677|GO:0006355
Car03g00158 363 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 8 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00158 Car-Chr3 3467982 3474186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00158 17 363 NAC Transcription Factor Family AT5G07680 47.701 9.01e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car03g00158 NAM 7.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00158 - - cam:101488836 748.043