Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00147 ATGTCGGAGACAAAAGACCCGGCGATTAAGCTATTTGGAAAGACGATTCCGGTGCCGGATATTCTTGTCGGAACTCCGGCTTTATCTTCCGGTGATGTTGTTGACGAGAGTATTGATCAGAATCATGATTCTTCTATCAACTCTTCTAAGGATGAACAAGAACAAGAAATTGTGATGGACACATTGGGAGACAAACCAACTGATGGGAAAAAGGAAGATGGAGTCCCTACCAAATCGTCGGAAGAATTCTCCACTCCAGATGCAGCCTCTAGGACTGGTGAAGAATCTGAGAGGGAGGCTGCTACGTTGAAAACTTCAAAGATTGAAGAAGAACAAGATGAGACAAGTAATTCACATGACAAGAACCTAAAAAAACCAGACAAAATATTGCCTTGTCCCCGTTGTAGTAGCATGGACACCAAATTTTGCTACTATAATAATTATAATGTCAACCAACCTCGTCACTTCTGCAAGAATTGTCAGAGATACTGGACTGCGGGTGGAACAATGAGAAATGTACCGGTAGGTGCCGGTCGCAGAAAGAACAAGAACTCTTCTTCTCACTATCGTCAAATAACTGTCACCGAATCAACACTTCAGAATTCTCGGACAGACTTTCCGCGTAGATCCTACCAACCTTCTTTGAAATGCAATGGTACACTACTTACATTTGGATCCGAAACACCCTTGTGTGAATCAGTGGCATCTGTTTTGAAACTTGCTGATAGAACAGTGCAAAATTACGCAAGAAATGGATTTGATAAACCTGAAGAACTACGAATTTGTGTTCCACATGCCACTGGAGAAAAAGGCGATGATCAATCCAATAAATCATCTATTACCTCGACAAAGTCAATGGAAGGTGGAAGAACCAATGTATCCCAAGAACAAGCTATGTCGAATGGACAAAGTTTCCCCCTACAAGGTCACTACTTTCGTCCTGGAACTCCTTGGCCTTTTCCATGGAACCCAATGCAGTGGAGCTCACCAGTGCCACCACCTTCTCTTTGCCAACCTGGATTTTCTCTACCACTCTATCCTGCAACGACTTACTGGGGTTGTACCGTGCCAGGTGCATGGAACATCCCATGGCAAGCACAACCATTATCACCAAATGGTGCAAACCTTAACTCTAGTCCCAACTCTCCAACCTTAGGTAAACATTCAAGGGAAGATAACTCGATCAGATCGAGTGACTCCAGCGGAACAGATGGAGATGGTAAGAAAGAAAGTAGCGAAGAAAAGTGCTTGTGGTTTCCAAAAACTTTGAGGATTGATGACTCAAGAGAAGCAGAAAAAAGCTCGTTCTGGACAACACTCGGGATTAAAAATGACAACACCAACTCAGTTCCTTCAAGAGGACTCTTTGAAGCATTCCCTTCAAAATGTGATGATAAAAATCACTCGGTGCAAGCCTCACTTGTCTTGCAAGCCAATCCGGCAGCACTGTCTAGATCACTTAACTTTCAAGAGACTTCGTAA 1482 0.4325 MSETKDPAIKLFGKTIPVPDILVGTPALSSGDVVDESIDQNHDSSINSSKDEQEQEIVMDTLGDKPTDGKKEDGVPTKSSEEFSTPDAASRTGEESEREAATLKTSKIEEEQDETSNSHDKNLKKPDKILPCPRCSSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSSHYRQITVTESTLQNSRTDFPRRSYQPSLKCNGTLLTFGSETPLCESVASVLKLADRTVQNYARNGFDKPEELRICVPHATGEKGDDQSNKSSITSTKSMEGGRTNVSQEQAMSNGQSFPLQGHYFRPGTPWPFPWNPMQWSSPVPPPSLCQPGFSLPLYPATTYWGCTVPGAWNIPWQAQPLSPNGANLNSSPNSPTLGKHSREDNSIRSSDSSGTDGDGKKESSEEKCLWFPKTLRIDDSREAEKSSFWTTLGIKNDNTNSVPSRGLFEAFPSKCDDKNHSVQASLVLQANPAALSRSLNFQETS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00147 493 MobiDBLite consensus disorder prediction 273 299 - -
Car03g00147 493 MobiDBLite consensus disorder prediction 371 413 - -
Car03g00147 493 ProSiteProfiles Zinc finger Dof-type profile. 130 184 IPR003851 GO:0003677|GO:0006355
Car03g00147 493 MobiDBLite consensus disorder prediction 266 299 - -
Car03g00147 493 MobiDBLite consensus disorder prediction 371 388 - -
Car03g00147 493 ProSitePatterns Zinc finger Dof-type signature. 132 168 IPR003851 GO:0003677|GO:0006355
Car03g00147 493 MobiDBLite consensus disorder prediction 389 413 - -
Car03g00147 493 MobiDBLite consensus disorder prediction 21 130 - -
Car03g00147 493 PANTHER CYCLIC DOF FACTOR 2 1 492 IPR045174 GO:0003700|GO:0006355
Car03g00147 493 Pfam Dof domain, zinc finger 127 184 IPR003851 GO:0003677|GO:0006355
Car03g00147 493 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 492 - -
Car03g00147 493 MobiDBLite consensus disorder prediction 45 78 - -
Car03g00147 493 MobiDBLite consensus disorder prediction 91 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00147 Car-Chr3 3288917 3291880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00147 6 493 C2C2-Dof Transcription Factor Family AT5G39660 42.218 2.08e-103 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car03g00147 zf-Dof 4.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00147 - - aprc:113862693 722.62