Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00125 ATGGACATAACCCcaacaacaacaacaacaccaaccattttaacaacatcaacaacaacattaacaaaatcaccagaacatgaaactgaaacacccaccaaaatcacaacatccaacacacaaacaacaccaaaaaTCTTGTCTTTTTCCAACGGTGTTCTCAAACGccaccaccaccttaacaaccaccaccacaaccaccaAGTAACTGTTACTTACAAAGAATGTCTCAAAAACCACGCAGCCAACTTAGGTGGCCACGCCCTCGACGGTTGCGGCGAATTCATGACATCTCCCACCGCAACATCCGCCGACCCAACTTCCATAAAATGCGCCGCATGTGGCTGCCACCGTAATTTCCACCGCCGCGAACCAGAAGAACCACCACTTTCCACCACCACCACACACGTAATCGAATATCAACCTCACCACCGCCATCAACCACTTCCACCGCCGCCGTTTTCCAACCGTAGCCCCAATTCATCTTCACCACCTCCGATCTCTTCATCTTACTACCCATCCGCCCCTCACATGCTCATCGCACTCTCAACTGCCCTTCCGGAAAATACGGCCGTCCCTAACACTGCCTTGATCTCTCCTGGGTCCCACACTAGAAAACGGTTTAGAACAAAATTTTCTCAAGAACAAAAGGATAAAATGTTGAAATTTGCTGAAAAAGTTGGTTGGAAGATTCAAAAGCGTGACGATGATTTGATTCATGAGGTTTGTAATgaaattggtgttgatagaactgttctcaaagtttggatgcataacaacaagaacaatttcactaaGCGAGacaacaacaacatcatcaacaatatgatggaaagcaataacaacaaTGAGATTGGTGTTAAGAGTTTTCTGCCACTTGAGGATGAAGAACACAAAGCTGATATGAATGCTGAGATTCATACTCATCATAGTCATTACCAGAATGAAGGTGGAGTTCGTGCTAATGGTTCATCTTCTTCTTCTTGA 987 0.3404 MDITPTTTTTPTILTTSTTTLTKSPEHETETPTKITTSNTQTTPKILSFSNGVLKRHHHLNNHHHNHQVTVTYKECLKNHAANLGGHALDGCGEFMTSPTATSADPTSIKCAACGCHRNFHRREPEEPPLSTTTTHVIEYQPHHRHQPLPPPPFSNRSPNSSSPPPISSSYYPSAPHMLIALSTALPENTAVPNTALISPGSHTRKRFRTKFSQEQKDKMLKFAEKVGWKIQKRDDDLIHEVCNEIGVDRTVLKVWMHNNKNNFTKRDNNNIINNMMESNNNNEIGVKSFLPLEDEEHKADMNAEIHTHHSHYQNEGGVRANGSSSSS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00125 328 MobiDBLite consensus disorder prediction 142 170 - -
Car03g00125 328 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 1 288 - -
Car03g00125 328 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 73 124 IPR006456 -
Car03g00125 328 Pfam ZF-HD protein dimerisation region 71 125 IPR006456 -
Car03g00125 328 Gene3D - 196 266 - -
Car03g00125 328 SUPERFAMILY Homeodomain-like 199 266 IPR009057 -
Car03g00125 328 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 72 124 IPR006456 -
Car03g00125 328 MobiDBLite consensus disorder prediction 1 39 - -
Car03g00125 328 MobiDBLite consensus disorder prediction 145 160 - -
Car03g00125 328 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 288 - -
Car03g00125 328 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 205 262 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00125 Car-Chr3 2701573 2703149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00125 1 261 ZF-HD Transcription Factor Family AT5G15210 49.237 4.38e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Car03g00125 ZF-HD_dimer 6.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00125 - - gmx:100789447 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00196 02 1988584 1990060 Car03g00125 03 2701573 2703149 PCT