Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00121 ATGCTCCACAATGACGGAATCGCAATCACCGCGGAGAAGATTAACACTATCTTGAAGGCTGCTGGCGTCACTGTCGTATCATACTGGCCAAGCTTATTCGCCAAACTTGCTCAGAATAAGAGCATTGACGATCTCGTTTTGAACGCTAGCgctgccggtggtgccgctgttgccgtatctgctcctgccgctgctgctgctggtggagccgctgcagctgccgcacctgccgcCGAGGCCAAGAAGGTACTGTTAGTAATGCTTTATATTAGGTTTCTGTCTTAA 285 0.3158 MLHNDGIAITAEKINTILKAAGVTVVSYWPSLFAKLAQNKSIDDLVLNASAAGGAAVAVSAPAAAAAGGAAAAAAPAAEAKKVLLVMLYIRFLS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00121 94 CDD Ribosomal_P1 1 48 - -
Car03g00121 94 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 2 82 - -
Car03g00121 94 Pfam 60s Acidic ribosomal protein 9 82 - -
Car03g00121 94 Gene3D - 1 49 IPR038716 -
Car03g00121 94 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 2 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00121 Car-Chr3 2642028 2642400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00121 1 87 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 48.276 5.88e-22 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00121 K02942 - qsu:112022510 82.8037