Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00119 ATGAGTGTCGGCGAGTTAGCATGCATCTACTCCATCTTGATGCTCCACAATGACGGAATCGCAATCACCCCAAGCTTATTCGCCAAACTTGCTCAGAATAAGAGCATTGACAATCTCGTTTTGAACgctggctctgccggtggtgccgctgttgtcgtatctgctcctgccgctgctgctgctggtggagctgctgcagctgccgcacctgccgcCGAGGCCAAGAAGGTACTGTTAGTAATGCTTTATATTAGGTTTCTGGCTTAA 267 0.2884 MSVGELACIYSILMLHNDGIAITPSLFAKLAQNKSIDNLVLNAGSAGGAAVVVSAPAAAAAGGAAAAAAPAAEAKKVLLVMLYIRFLA 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00119 88 Pfam 60s Acidic ribosomal protein 21 76 - -
Car03g00119 88 Gene3D - 1 24 IPR038716 -
Car03g00119 88 Coils Coil 88 88 - -
Car03g00119 88 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 24 76 - -
Car03g00119 88 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 24 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00119 Car-Chr3 2609033 2609443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00119 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 39.000 3.11e-15 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00119 K02942 - qsu:112022510 60.4622