Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00109 ATGGAAGCAAATGCCATACTCAATAGTGGATGGTGGAATACATCTGATCCATACTTTAATATCTCCAACCGATGTAATTGGATTGGTATGTTCTGCAACGAAGTTGGAAGCATTAAAGAAATCAACATTATAATCCTATCATTATCACTCGTCATATGCTTAAAACGTCATCAAAATTCTATTAAGAACAAGCATGAAAACACAATGACAACAAAGAATGGAGACTTGTTTTGTGTATGGAACTATGATGGAAAAATAGCACATGATGACATCATCAAAGCAACAGAAGACTTTGACATGAGATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAGAGCACAATTACCATGTGGAAGGGTTGTTGCTTTGAAGAAACTTCATGGCTATGAAGCAGAGGTTCCTGCTTTTGAGGAGAGTTTCAGAAATGAAGTGAGAATATTATCTGAAATAAAGCACAAACATATTGTGAAGCTTTATGGATTCTGCTTGCATAGAAGAATCATGTTTTTGATGTATGAGTACATGGAAAGAGGAAGCTTATTCTCTGTGTTGTATGATGATGTAGAAGCCATGGAATTCGGTTGGAGAAAAAGGGTAAACACAATAAAAGGAGTTGCATTTGCTTTATCATATCTTCATAATGATTGCACATATCCAATAGTGCATAGAGATGTATCTTCAAACAATATATTGCTAAACTCTGAGTGGCAGCCTACTGTTTCTGACTTTGGCACAGCTCGACTCCTTCAATTTGATTCATCCAATCGAACAATTGTTGCTGGAACTATTGGATATATAGCTCCTGCTAAATCATTCTTTGCTCTTTTTAATGATgttaaattacattggttccttgactaa 867 0.346 MEANAILNSGWWNTSDPYFNISNRCNWIGMFCNEVGSIKEINIIILSLSLVICLKRHQNSIKNKHENTMTTKNGDLFCVWNYDGKIAHDDIIKATEDFDMRYCIGTGAYGSVYRAQLPCGRVVALKKLHGYEAEVPAFEESFRNEVRILSEIKHKHIVKLYGFCLHRRIMFLMYEYMERGSLFSVLYDDVEAMEFGWRKRVNTIKGVAFALSYLHNDCTYPIVHRDVSSNNILLNSEWQPTVSDFGTARLLQFDSSNRTIVAGTIGYIAPAKSFFALFNDVKLHWFLD 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00109 288 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 35 - -
Car03g00109 288 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 42 271 - -
Car03g00109 288 Pfam Protein kinase domain 104 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00109 288 ProSitePatterns Tyrosine protein kinases specific active-site signature. 222 234 IPR008266 GO:0004672|GO:0006468
Car03g00109 288 ProSiteProfiles Protein kinase domain profile. 98 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00109 288 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 42 271 - -
Car03g00109 288 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 35 - -
Car03g00109 288 Gene3D Transferase(Phosphotransferase) domain 1 177 273 - -
Car03g00109 288 Gene3D Phosphorylase Kinase; domain 1 55 176 - -
Car03g00109 288 SUPERFAMILY Protein kinase-like (PK-like) 86 270 IPR011009 -
Car03g00109 288 ProSitePatterns Protein kinases ATP-binding region signature. 104 126 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00109 Car-Chr3 2302702 2303568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00109 43 277 Receptor kinase-like Gene Family AT4G08850 48.750 2.54e-70 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car03g00109 Pkinase 2.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00109 - - mtr:MTR_8g047160 396.356