Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00102 ATGTCAAAAATGTCTAGTCCTAGTTGTTCAGAGATAGAAGAGAAGAAAGTTACTTCAATTTCCCATGAAGCTAATTTTTCTACTCAACAAGAGGTTACAAAGGAAGATAAATTTCAATATGTAaaagatgagatgggggaagtgaaagaagaaaatgaaagattaaagatgaTGCTAGAACGCGTGGAAAAAGACTACAATACCCTTCAACTCCGCTTCTTTGACATCGTCAACAAAGAAGTTTCTAACAAAGGTTTAACAAATTCATCTACTTCACATGATGAAACTAATGAAGAAGAACCTGAATTTGTGTCACTTAGCCTTGGAAGAACTCCTCCAAATGAGTATAAAAAAGAAGCAAGAATTGAAAAGCCTAAAGAAAAAGAAGAAGATATGGAAATCAACCTTAGTCTTGGATTAGACTCAAAATATATGTTATCAATGGAATTAGTATCTGATAATTTGAGTCCAATGAATAGCTCAGAAGAATTACCAAAGGAAAAAGAATTAGTAGAAGAAACACTATTAATGTCAAGTAATAAATCAACAAAAATGATAAATGTAAATGATGATATTTCAGATCAAATGCCTGCTAAAAGAGTTAGAGTATCTGTAAGAGCTAAATGTGATACTCCAACGATGAATGATGGATGTCAATGGAGAAAATACGGACAAAAGATAGCAAAAGGAAATCCATGTCCAAGGGCTTACTATCGTTGCACAGTTGCACCAGCATGTCCAGTTAGAAAACAGGTACAAAGATGTGCTGATGACATGTCAATCTTAATAACAACATATGAAGGAACACACAATCACCCTCTTCAAGTTTCAGCATCAGCAATGGCATACACAACTTCAGCAGCTGCATCAATGATGTTATCAGGTtcatcaacatcatcatcatcatcatctcatcatGAAAATCATCACCAAAATTCCACATCTTTTGGAAACCCTCCAACACTACTTAATGGCCTTAATTTCACCCACCAAATTGATGAATCAAAACCAAAACATTACTTCCTTCCACCAAATCATATCTCACATAATAATAATTTATTCCCAACCATCACTTTAGACCTAACTTCATCTTCATCAACTCATATCCataataataataataataataataataataataatTTACCTTCAAATATAGCTTCAATTCCAAGATTTTCACCAAATAATCTAAATTTTTGTTCCACACAACCAAATTATATGACACCATCATCCAATTGGGGAAATAAATTAGGGTTTCTTAACAATAACACAACCACAATGCCAATTGAAAAAACAACTCAAATGAGACCTTTTTTCcaacaacaacaacaacaacaTAATTTCTATCAAAATTCAATGGCAAATCAAATTCCTTATTCAAAGGAATTATCTTTGGCTGAAACAATAACAAAAGCAATTAGCAATGATCCAAGTCTTCATTCAGTTATAGCTTCAGCTGTTTCATCAATAGTACAAGGATCATCAAACAATGGTGGAAAGCATGAAGAAATAGGGTTGAATTTGAAACTTGGAGAGAATTCACAATTGGTTTCAAACAATTTGTTGAATCAAAATGGTAAAGGTTGCATAAATGGTTACTTTAAAAGGTTGAACTCTACAAGTTCACAAACAAAGAATTTCATGCTTCTTCAACCTTCATTGCCATTTTCTGTTTCTAAGAGTAGCACAAGTAAAGCTCCATCAATTGTTAATCATATTAATCATTATGATCTTAATATGAACACACATCATTAG 1755 0.3043 MSKMSSPSCSEIEEKKVTSISHEANFSTQQEVTKEDKFQYVKDEMGEVKEENERLKMMLERVEKDYNTLQLRFFDIVNKEVSNKGLTNSSTSHDETNEEEPEFVSLSLGRTPPNEYKKEARIEKPKEKEEDMEINLSLGLDSKYMLSMELVSDNLSPMNSSEELPKEKELVEETLLMSSNKSTKMINVNDDISDQMPAKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDMSILITTYEGTHNHPLQVSASAMAYTTSAAASMMLSGSSTSSSSSSHHENHHQNSTSFGNPPTLLNGLNFTHQIDESKPKHYFLPPNHISHNNNLFPTITLDLTSSSSTHIHNNNNNNNNNNNLPSNIASIPRFSPNNLNFCSTQPNYMTPSSNWGNKLGFLNNNTTTMPIEKTTQMRPFFQQQQQQHNFYQNSMANQIPYSKELSLAETITKAISNDPSLHSVIASAVSSIVQGSSNNGGKHEEIGLNLKLGENSQLVSNNLLNQNGKGCINGYFKRLNSTSSQTKNFMLLQPSLPFSVSKSSTSKAPSIVNHINHYDLNMNTHH 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00102 584 MobiDBLite consensus disorder prediction 293 321 - -
Car03g00102 584 Gene3D WRKY domain 199 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g00102 584 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00102 584 SUPERFAMILY WRKY DNA-binding domain 208 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g00102 584 MobiDBLite consensus disorder prediction 114 129 - -
Car03g00102 584 MobiDBLite consensus disorder prediction 86 129 - -
Car03g00102 584 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 569 IPR044810 GO:0003700
Car03g00102 584 Pfam WRKY DNA -binding domain 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00102 584 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 37 569 - -
Car03g00102 584 Coils Coil 45 72 - -
Car03g00102 584 MobiDBLite consensus disorder prediction 1 34 - -
Car03g00102 584 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00102 Car-Chr3 2205204 2208348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00102 45 560 WRKY Transcription Factor Family AT5G15130 41.026 6.17e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g00102 WRKY 4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00102 - - mtr:MTR_7g009730 665.996