Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00098 ATGGGGTTTAGGAATAATGCAATTCAAGCTGGAAGTTTGGATTTTGGGAAGTCAAAGGGAAAAATGAAGAAAGATGATGATGAGAAGGAAATTGGGTGTTGTGTTAAATTTAGTTGCTTTGGAAAGTGCTTACCTTCAAGATCAAAGGTTGATACTTCCATAAGTGGTACTACAAGTGCTCATAGTGTGGAAAAAACATCTGCATATGAGAAAAGAAAAAAGGAAAAAAGTGCTCCTCCAGGATCATCTACAACTAGTAATGCAGAAAGTATACCTTCCACTCCAAAGTTCAGTGAGGAATTGAAGGTTTCTTCTCATTTGAGAAAATTCACATTCAATGAGCTAAAGTTGGCAACTAGGAATTTCAGACCGGAGAGTCTTCTTGGCGAGGGAGGATTCGGTTGCGTCTTCAAGGGTTGGATCGAGGAGAACGGAACTGCACCTGTGAAACCAGGTACTGGACTTACCGTCGCAGTAAAGACCCTCAATCATGACGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGTTAGACATTCTTGGTGATATTGTCCACTCGAATCTCGTTAAATTGATCGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATCAGTTTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAAAAGGGTCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATCGCTCTTGGAGCCGCAAAAGGTCTTCATTTTCTTCATGAAGAAGCTCAAAGGCCTATAATCTATCGCGATTTCAAGACATCCAATATTCTATTAGATGCAGAATACAATGCAAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCTCAAGGGGAAAAGACACACATATCAACAAGAGTTATGGGAACATATGGTTATGCCGCTCCTGAGTATGTTATGACCGGTCATTTGACATCAAAAAGCGACGTCTATAGTTTTGGAGTTGTGCTACTTGAAATGCTCACTGGTCGGCGAGCTGTTGATAAGAATAGACCAAACGGAGAACACAACCTTGTGGAATGGGCAAGACCTGTACTTGGAGACCGAAGATTGTTATTCCAAATAATTGATCCTCGTCTTGAAGGTCACTTCTCGATCAAAGGGGCACAAAAATCTGCCCAACTAGCCGCTCAGTGTCTTAGCCGTGATCCAAAAGTTAGACCTATGATGAGTCAAGTTGTTCAAGCTCTAAAGCCTTTGCAAAACCTCAAGGATATGGCTATCGCATCTTATCATTTTCAAGTTGTTCGAGTAGATCGTACGATGTCCATGCCGAATTCTAAAAACAGTATGCAAAAACAGTTAACTTCTTTATCAAGAAAGGGTCAACCCGTAAGGATCTTGTCGAGTCCAAATGGTCAACATGGTTCTCCGTATCGTCATTACACCAAGTCACCAAAACCTAATGGATAA 1431 0.4151 MGFRNNAIQAGSLDFGKSKGKMKKDDDEKEIGCCVKFSCFGKCLPSRSKVDTSISGTTSAHSVEKTSAYEKRKKEKSAPPGSSTTSNAESIPSTPKFSEELKVSSHLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELDILGDIVHSNLVKLIGFCIEDDQRLLVYQFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLHFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPQGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAVDKNRPNGEHNLVEWARPVLGDRRLLFQIIDPRLEGHFSIKGAQKSAQLAAQCLSRDPKVRPMMSQVVQALKPLQNLKDMAIASYHFQVVRVDRTMSMPNSKNSMQKQLTSLSRKGQPVRILSSPNGQHGSPYRHYTKSPKPNG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00098 476 SUPERFAMILY Protein kinase-like (PK-like) 96 403 IPR011009 -
Car03g00098 476 PANTHER RECEPTOR-LIKE KINASE PLANT 61 468 - -
Car03g00098 476 Gene3D Transferase(Phosphotransferase) domain 1 208 424 - -
Car03g00098 476 MobiDBLite consensus disorder prediction 430 476 - -
Car03g00098 476 MobiDBLite consensus disorder prediction 48 95 - -
Car03g00098 476 Gene3D Phosphorylase Kinase; domain 1 102 207 - -
Car03g00098 476 PANTHER OS01G0588500 PROTEIN-RELATED 61 468 - -
Car03g00098 476 ProSiteProfiles Protein kinase domain profile. 122 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00098 476 MobiDBLite consensus disorder prediction 79 95 - -
Car03g00098 476 MobiDBLite consensus disorder prediction 48 64 - -
Car03g00098 476 Pfam Protein kinase domain 125 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00098 476 ProSitePatterns Protein kinases ATP-binding region signature. 128 160 IPR017441 GO:0005524
Car03g00098 476 CDD STKc_IRAK 128 406 - -
Car03g00098 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Car03g00098 476 MobiDBLite consensus disorder prediction 430 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00098 Car-Chr3 2027485 2032298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00098 87 419 Glycoside Hydrolase AT3G07070 51.014 3.01e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car03g00098 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00098 - - aprc:113861691 862.062