Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00094 ATGGCAATGATGTTAGAGAATGAAATGAGTTTGAAAAAGAGTCAAAGGTCCATGGAAAAATTTGAGGTAAAAGGAGCACGTTCTGTCAAGAGGCAAAGAAGAGAACATGTTATTGCATCAAAAAGAGGCCATGATAACCATAAGCAACAAGTTGGTGAAATTGAAAATTCTACAATTAATACTATAAAGAGAAGTTCAAAATTTCGCGGTGTTAGCAGGCATAGATGGACAGGTCGATATGAAGCTCATTTATGGGACAAACATTCTTGGAACATAACACAAAAGAAGAAAGGGAAACAAGTATACCTTGGGGCTTATGATGAAGAAGAAGCTGCCGCAAGAGCATATGATTTAGCTGCAATTAAGTATTGGGGAACATCAACATTCACAAATTTTTCGATATCAGATTATGAGAAAGAGGTAGAAATAATGAATACTATGACCAAAGAGGAGTACTTGGCTACATTAAGAAGAAAGAGCAGTGGCTTTTCAAGAGGTGTCTCAAAGTATAGAGGTGTTGCAAGGCACCATCATAATGGTAGATGGGAAGCAAGGATAGGAAGAGTTTTTGGAAACAAATATCTTTATCTTGGAACCTATAGTACACAAGAGGAAGCTGCAAGAGCTTATGACATAGCTGCAATTGAGTACAGAGGAATTCATGCTGTAACCAACTTTGAATTAAGCAGTTACATAAAATGGTTAAAGCCAGAAAGTACCACAGAAACAAAACATGAATCAAAAGCACTTCCACAAGACTCACAGAAAGTAGCATCACCAAATAACTCTACTCTAATACAAGAATCAAAGTTATTAGCCCTTAAAAAGAGTTTTTTCAATTCAGATTACATGAATTCAAATGAAAAGCAAGAACCATCAATTGAAAACAAAAACTACAGTTTCTTGAGCAACAAGTCAACTTCTCCAACCGCGCTTAGCCTTCTCCTTCGATCTTCGTTGTTTAGAGAATTACTCGAAAAGAATTCAAATGTATCTGAGGATCATGAAGTCACAAAAGAACAACAGCAACAACATAATACAGCTAGTGATGATGAATTTGGAGGAATATTCTATGATGGTTTTGACAATATCCAATTTGACTTTGATACCAACAAATGCAACATAGAATTGCAAGAAAGAGACTTGTATTCAATATTTTGTACATAG 1167 0.3548 MAMMLENEMSLKKSQRSMEKFEVKGARSVKRQRREHVIASKRGHDNHKQQVGEIENSTINTIKRSSKFRGVSRHRWTGRYEAHLWDKHSWNITQKKKGKQVYLGAYDEEEAAARAYDLAAIKYWGTSTFTNFSISDYEKEVEIMNTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFELSSYIKWLKPESTTETKHESKALPQDSQKVASPNNSTLIQESKLLALKKSFFNSDYMNSNEKQEPSIENKNYSFLSNKSTSPTALSLLLRSSLFRELLEKNSNVSEDHEVTKEQQQQHNTASDDEFGGIFYDGFDNIQFDFDTNKCNIELQERDLYSIFCT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00094 388 MobiDBLite consensus disorder prediction 12 33 - -
Car03g00094 388 ProSiteProfiles AP2/ERF domain profile. 67 133 IPR001471 GO:0003700|GO:0006355
Car03g00094 388 ProSiteProfiles AP2/ERF domain profile. 169 227 IPR001471 GO:0003700|GO:0006355
Car03g00094 388 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 25 371 - -
Car03g00094 388 MobiDBLite consensus disorder prediction 331 350 - -
Car03g00094 388 MobiDBLite consensus disorder prediction 1 33 - -
Car03g00094 388 Pfam AP2 domain 66 125 IPR001471 GO:0003700|GO:0006355
Car03g00094 388 Pfam AP2 domain 168 219 IPR001471 GO:0003700|GO:0006355
Car03g00094 388 SUPERFAMILY DNA-binding domain 168 228 IPR016177 GO:0003677
Car03g00094 388 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Car03g00094 388 PRINTS Ethylene responsive element binding protein signature 209 229 IPR001471 GO:0003700|GO:0006355
Car03g00094 388 Gene3D AP2/ERF domain 168 229 IPR036955 GO:0003700|GO:0006355
Car03g00094 388 Gene3D AP2/ERF domain 66 135 IPR036955 GO:0003700|GO:0006355
Car03g00094 388 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 25 371 - -
Car03g00094 388 SUPERFAMILY DNA-binding domain 66 134 IPR016177 GO:0003677
Car03g00094 388 SMART rav1_2 67 139 IPR001471 GO:0003700|GO:0006355
Car03g00094 388 SMART rav1_2 169 233 IPR001471 GO:0003700|GO:0006355
Car03g00094 388 CDD AP2 168 229 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00094 Car-Chr3 1982354 1985572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00094 63 261 AP2-EREBP Transcription Factor Family AT5G57390 58.685 4.89e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Car03g00094 AP2 3.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00094 - - gmx:100792612 518.464