Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00080 ATGGGTGGttcttcacctcctacttcttttcctgcttcatcgtcgtcatcatcatcttcgtgttgctctcgtttcttGTCATCGGCGCTTCGATCCAAACGCTTAGTCACGCCGGCGGAGAAGACAGCTCGGGATAATTCCGGCCGTGGTCTCTCCCGCCGGCTCGGCGTCTTCGACCTTATACTCCTCGGGATCGGAGCTTCCATCGGCGCCGGTATCTTCGTCGTCACCGGCACCGTCGCTCATGACGCCGGACCAGGGGTAACAATAAGTTTTATACTTGCTGGAGCATCCTGTGTTATAAATGCACTCTGTTATGCTGAGCTAGCTTCTCGATTTCCTGCTGTTGTTGGAGGAGCATATCTATATGCATATACGGCTTTTAACGAACTTACAGCTTTTCTTGTTTTTTCGCAATTAATGCTTGACTATCATATTGGGGCAGCTAGTATAGCAAGAAGCTTAGCAAACTATATTGTTACATTTCTAGAGATCTTTCCTGTATTAAAAGATAACATTCCAAAATGGATTGGACACGGTGCAAACTTTGGAGACGTGCTATCCATCAATGTCTTAGCTCCGGTTCTCCTAATGCTTCTCACTTTAGTTCTCTGTCTTGGTGTTAAAGAATCATCAGCTGTGAATTCGTTTATGACAGTGACCAAGATAACCATTGTTATTATTGTCATTTTTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTGTAAGAAGCATCTTCACAGGAGCTACTGTAGTCTTCTTTGCGTACGTTGGATTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAAGCCACAGCGGGATTTGCCAATAGGCATAATTGGAAGCCTCTTGGTATGTATTGCATTGTACATTGGAGTATGCTTAGTGATTACTGGAATGGTTCCGTACAATCTTCTTGGAGAAGATGCTCCTTTGGCTGACGCTTTTAAATCTAAGGGACTCAAATTTGTTTCTATTCTGATTAGTATTGGTGCTATTGCTGGCCTTACAACAGCACTCCTTGTTGGTCTCTATGTTCAGTCTCGGCTATATCTTGGTCTTGGCAGGGATGGTTTACTACCCTCAATATTTGCTAAAGTTCATCCCAAACGCCACACCCCTATTCATTCTCAACTTTGGGTTGGCTGTATTGCCAGTATTTTGGCCGGGCTTTTTAATGTGCACATGCTCTCGCACATTCTTTCTGTTGGTACGCTGACTGGCTATTCAGTTGTATCGGCATGCGTTGTTGTACTTCGTTGGAAGGATAAGACAAATGGTCTAGTATCGTCTTCAGCTAGGCGAGAAGGTTTAATTTGCCTCATTGCTGTTGCTGTTTGTGGATTTGCTGCGGGGCTCTTGTTCCGTTATGAGGCTTCAATTATCTTTGTAATTCTGGCTATAGTTGTTGGAGTTGGTGCTTCTCTTGCTCTTCTTTTCCGCCAGGTTTATGCAGATTCACCAGGGTTTTCTTGTCCTGGAGTTCCTCTTGTTCCCAATGTTTGCATCTTCTTTAACATGTTCTTATTTGGCCAGTTACATCATGAAGCATGGGTGAGATTTGTGATTGTAAGTATTATTATGGTCGGTGTTTATGCAATATATGGCCAGTATCATGCTGACCCAAGTGCAGAAGATAACGCTATTTATCACGAGGCTCCAGCGGAATAA 1698 0.4211 MGGSSPPTSFPASSSSSSSSCCSRFLSSALRSKRLVTPAEKTARDNSGRGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFSQLMLDYHIGAASIARSLANYIVTFLEIFPVLKDNIPKWIGHGANFGDVLSINVLAPVLLMLLTLVLCLGVKESSAVNSFMTVTKITIVIIVIFAGAFEVDVSNWSPFAPNGVRSIFTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYNLLGEDAPLADAFKSKGLKFVSILISIGAIAGLTTALLVGLYVQSRLYLGLGRDGLLPSIFAKVHPKRHTPIHSQLWVGCIASILAGLFNVHMLSHILSVGTLTGYSVVSACVVVLRWKDKTNGLVSSSARREGLICLIAVAVCGFAAGLLFRYEASIIFVILAIVVGVGASLALLFRQVYADSPGFSCPGVPLVPNVCIFFNMFLFGQLHHEAWVRFVIVSIIMVGVYAIYGQYHADPSAEDNAIYHEAPAE 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00080 565 Pfam Amino acid permease 55 466 IPR002293 GO:0016020|GO:0022857|GO:0055085
Car03g00080 565 Pfam C-terminus of AA_permease 499 548 IPR029485 -
Car03g00080 565 PANTHER CATIONIC AMINO ACID TRANSPORTER 9, CHLOROPLASTIC 15 562 - -
Car03g00080 565 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 15 562 - -
Car03g00080 565 Gene3D Amino acid/polyamine transporter I 51 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00080 Car-Chr3 1808341 1814485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00080 17 492 Organic Solute Cotransporters AT1G05940 71.726 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00080 K03294 - gmx:100804988 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00125 02 1205455 1207298 Car03g00080 03 1808341 1814485 PCT