Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00059 ATGGGTGCAACTGGGACAGGAAAAACTAAACTTTCCATCAACTTGGGTACACAATTCAATTCTGAAATCATTAACTCCGACAAAATTCAAGTTTACAAAGGTGTTGATATTGTGACCAACAAGGTACATGAATCAAAACGTTGTTCCGTTCCACATCACATGTTAGGAGTCATTGATGATTCTAATTATGATTTCACTGTGGATGATTTTTGCAAGCACGTTCTCAAAGCTTTGGATATCATTATTGAAAATGGTCACCTACCAATTAATGTAGGAGGGTCAAATAGATATTTAAAAGAATTAATTGATGACTCAATTATTTCATTTCGTTCTAAATATGATTGTTGTTTTATTTGGCTTGATGTTTCTTTACCTATTTTGTCTCAATATTTAGACACAAGGGTTGATGAAATGGTTGATGAAGGGCTTGTGGATGAAATTAGATAA 447 0.3311 MGATGTGKTKLSINLGTQFNSEIINSDKIQVYKGVDIVTNKVHESKRCSVPHHMLGVIDDSNYDFTVDDFCKHVLKALDIIIENGHLPINVGGSNRYLKELIDDSIISFRSKYDCCFIWLDVSLPILSQYLDTRVDEMVDEGLVDEIR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00059 148 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 148 - -
Car03g00059 148 Pfam IPP transferase 110 148 - -
Car03g00059 148 Pfam IPP transferase 30 104 - -
Car03g00059 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 135 IPR027417 -
Car03g00059 148 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 148 IPR039657 -
Car03g00059 148 Gene3D - 1 123 IPR027417 -
Car03g00059 148 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 124 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00059 Car-Chr3 1461608 1462054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00059 65 147 C2H2 Transcription Factor Family AT2G27760 30.000 1.52e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00059 K10760 - gmx:121173984 249.98