Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00053 ATGGCTACTATTTCACTCAAACATAACAACCCAAAAGTAAACAACATTCATCAACAAAAGGGTCACATCATAATTGAAGAAATTGAAGGACTCATAAGAGTTCACAAAGATGGTCATGTAGAAAGACCACAAATTGTTCCCAATGTCTCATGCAAAGTTCCATCCGAAAATGGTGTAACTTCAAGAGATGTTACAATCAATAGAGACACAAATCTATTTGCACGTGTTTATGTTCCATCATCAATATTATTATTAACCTCTCataataataataataataataataaGCTTCCTTTGCTTGTTTATTTCCATGGTGGTGGATTTTGTGTTGGTTCTACTTCTTGGATTTGTTACCATGAGTTCTTAAACAACCTTGCTATCAAAGCAAATTGTGTCATTCTCTCGGTTGATTATCGTTTAGCTCCTGAAAATCGTCTTCCTTTGGCTTATGATGATGGTTTCAACGCTCTCATGTGGATCAAACACGAAGCTTTAAATGGTACATTATACAATGGAGGGAGCAATAAGCAAAATTGGTGGTTAAGTCATTGCAACATGAAGCTTTTTCTAAGTGGTGATAGTGCTGGTGCTAATATAGCTTATAATGTAGCAACACGTTTAGCATCATCAAACATTAATTCATCATGTTTGAATCCATTTTGTCTAAAAGGTGTTATTTTGATTCAACCCTTTTTTGGAGGAGAAGAAAGGACTTTTTCAGAGAAGCACTTTCAACAACCACAAAATTCAGCACTTACTTTATCAATTTCTGATACTTATTGGCGTTTATCACTTCCTCTTGAAGCTACAATTACACGTGATCATCCTTATTGTAACCCTCTTGCAAATGGAATTGTTAATAAGTTGAGAGATTTGAAGCTTCCATCTATAATGGTTTGTGTTTCAGAATTGGATATACTAAAAGATAGAAACTTGGAATTCTCAAATGCTTTGGTAAAAGCAGGGAAAAAAGTTGAAACTTTTGTGTATAAAGGTGTTGGACATGCATTTCAAGTGTTGAATAATTATCAACTTTCTCATTATAGGACACAAGAAATGATGTCTCATATCAAGAACTTCATGAACTAG 1089 0.337 MATISLKHNNPKVNNIHQQKGHIIIEEIEGLIRVHKDGHVERPQIVPNVSCKVPSENGVTSRDVTINRDTNLFARVYVPSSILLLTSHNNNNNNNKLPLLVYFHGGGFCVGSTSWICYHEFLNNLAIKANCVILSVDYRLAPENRLPLAYDDGFNALMWIKHEALNGTLYNGGSNKQNWWLSHCNMKLFLSGDSAGANIAYNVATRLASSNINSSCLNPFCLKGVILIQPFFGGEERTFSEKHFQQPQNSALTLSISDTYWRLSLPLEATITRDHPYCNPLANGIVNKLRDLKLPSIMVCVSELDILKDRNLEFSNALVKAGKKVETFVYKGVGHAFQVLNNYQLSHYRTQEMMSHIKNFMN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00053 362 Pfam alpha/beta hydrolase fold 100 338 IPR013094 GO:0016787
Car03g00053 362 PANTHER CARBOXYLESTERASE 6-RELATED 12 361 - -
Car03g00053 362 SUPERFAMILY alpha/beta-Hydrolases 26 361 IPR029058 -
Car03g00053 362 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 188 200 IPR033140 -
Car03g00053 362 Gene3D alpha/beta hydrolase 8 362 IPR029058 -
Car03g00053 362 PANTHER ARYLACETAMIDE DEACETYLASE 12 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00053 Car-Chr3 1323568 1325310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00053 1 362 Carbohydrate Esterase AT5G16080 49.319 3.58e-115 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00053 - - gmx:100819429 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00053 03 1323568 1325310 Car03g00053 03 1323568 1325310 ECH